Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.69□□□□□ -2.3
Trav4-2A0A075B638 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.69□□□□□ -2.3
Trav4-2A0A075B638 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.69□□□□□ -2.3
Trav4-2A0A075B638 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.69□□□□□ -2.3
Trav4-2A0A075B638 Gm35558-202ENSMUST00000221819 499 ntBASIC0.69□□□□□ -2.3
Trav4-2A0A075B638 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Trav4-2A0A075B638 Gm26493-201ENSMUST00000083155 136 ntBASIC0.69□□□□□ -2.3
Trav4-2A0A075B638 Gm26265-201ENSMUST00000083277 135 ntBASIC0.69□□□□□ -2.3
Trav4-2A0A075B638 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm7869-201ENSMUST00000121457 1322 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm23202-201ENSMUST00000104376 129 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm13672-201ENSMUST00000117554 459 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm13885-201ENSMUST00000117569 187 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm6664-201ENSMUST00000119138 468 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm25981-201ENSMUST00000157921 295 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm22425-201ENSMUST00000158532 138 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm22136-201ENSMUST00000158751 268 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm20477-201ENSMUST00000174028 280 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Mir6335-201ENSMUST00000184081 98 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm28437-201ENSMUST00000190277 783 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm37081-201ENSMUST00000192034 196 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm43199-201ENSMUST00000200019 307 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm42960-201ENSMUST00000202160 241 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm29754-201ENSMUST00000206269 358 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm45207-201ENSMUST00000207469 145 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm45456-201ENSMUST00000210841 243 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Mir421-201ENSMUST00000083575 76 ntBASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Trav4-2A0A075B638 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm22780-201ENSMUST00000104084 132 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm23010-201ENSMUST00000104151 126 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm12636-201ENSMUST00000117395 624 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm14852-201ENSMUST00000120065 647 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm8121-201ENSMUST00000153583 499 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Mir3057-201ENSMUST00000175040 91 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm25707-201ENSMUST00000175120 96 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm27342-201ENSMUST00000183530 109 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm18546-201ENSMUST00000197245 676 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm43676-201ENSMUST00000197532 540 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm43894-201ENSMUST00000203274 688 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 AC134860.6-201ENSMUST00000226038 285 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Ear14-201ENSMUST00000049559 468 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm25079-201ENSMUST00000082529 203 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm26328-201ENSMUST00000082821 107 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm25794-201ENSMUST00000083286 107 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Gm26175-201ENSMUST00000083794 131 ntBASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Trav4-2A0A075B638 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm15452-201ENSMUST00000119877 240 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm23956-201ENSMUST00000157211 119 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Mir1942-201ENSMUST00000157274 63 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm23124-201ENSMUST00000157650 107 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm22768-201ENSMUST00000158366 153 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm24229-201ENSMUST00000158830 118 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Mir3098-201ENSMUST00000175416 87 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm18397-201ENSMUST00000176704 587 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Mir8119-201ENSMUST00000183371 129 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm27517-201ENSMUST00000184347 236 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm20118-201ENSMUST00000187207 162 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm42647-201ENSMUST00000195939 459 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm45226-201ENSMUST00000206602 288 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm45240-201ENSMUST00000211437 674 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 AC116726.2-201ENSMUST00000217629 986 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm21937-201ENSMUST00000222825 218 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm22299-201ENSMUST00000082663 136 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm24254-201ENSMUST00000083702 104 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm23104-201ENSMUST00000083722 104 ntBASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
Trav4-2A0A075B638 Gm25068-201ENSMUST00000103895 110 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm24079-201ENSMUST00000104352 132 ntBASIC0.65□□□□□ -2.31
Trav4-2A0A075B638 Gm14943-201ENSMUST00000118056 546 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms