Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm42924-201ENSMUST00000197261 185 ntBASIC0.2□□□□□ -2.38
Trav4d-3A0A075B625 Gm44050-201ENSMUST00000204263 527 ntBASIC0.2□□□□□ -2.38
Trav4d-3A0A075B625 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC0.2□□□□□ -2.38
Trav4d-3A0A075B625 Gm22443-201ENSMUST00000082890 107 ntBASIC0.2□□□□□ -2.38
Trav4d-3A0A075B625 Gm24282-201ENSMUST00000104232 66 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Gm12449-201ENSMUST00000117572 234 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Gm14884-201ENSMUST00000120456 196 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Gm11384-201ENSMUST00000121376 303 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Gm14530-201ENSMUST00000122391 333 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Gm21744-201ENSMUST00000178403 662 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Mir325-201ENSMUST00000083491 98 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Gm26175-201ENSMUST00000083794 131 ntBASIC0.19□□□□□ -2.38
Trav4d-3A0A075B625 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm23951-201ENSMUST00000104029 132 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm13343-201ENSMUST00000116474 105 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm14554-201ENSMUST00000119548 661 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm23329-201ENSMUST00000157415 108 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm22551-201ENSMUST00000157795 103 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Snora24-201ENSMUST00000174989 130 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm24154-201ENSMUST00000175261 130 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Mir3968-201ENSMUST00000175355 100 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm22252-201ENSMUST00000179316 79 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm28825-201ENSMUST00000186233 238 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Mir3961-201ENSMUST00000198795 59 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm18488-201ENSMUST00000215082 364 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm19326-201ENSMUST00000219818 326 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm11351-202ENSMUST00000225724 478 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Mir193a-201ENSMUST00000083461 66 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Snord33-201ENSMUST00000083694 84 ntBASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Trav4d-3A0A075B625 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Mir467h-201ENSMUST00000116759 121 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm26303-201ENSMUST00000116845 119 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm12656-201ENSMUST00000118149 577 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm12432-201ENSMUST00000119540 186 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm26102-201ENSMUST00000157251 284 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm24601-201ENSMUST00000157970 143 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm26484-201ENSMUST00000158018 106 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm25715-201ENSMUST00000158627 125 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm25166-201ENSMUST00000158909 111 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm26116-201ENSMUST00000175600 77 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm26968-201ENSMUST00000182894 481 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm37989-201ENSMUST00000195202 803 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm44446-201ENSMUST00000204864 255 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm17987-201ENSMUST00000206902 603 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm45614-201ENSMUST00000209994 721 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm18774-201ENSMUST00000218269 601 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.17□□□□□ -2.38
Trav4d-3A0A075B625 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm25506-201ENSMUST00000104339 70 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm12889-201ENSMUST00000118684 241 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm14980-201ENSMUST00000121247 736 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm25283-201ENSMUST00000157272 77 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm23208-201ENSMUST00000158666 127 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm24323-201ENSMUST00000175342 77 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Mir8106-201ENSMUST00000184520 139 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm44326-201ENSMUST00000198226 101 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm44825-201ENSMUST00000207557 150 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm44598-201ENSMUST00000207566 150 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm25038-201ENSMUST00000082928 130 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.16□□□□□ -2.38
Trav4d-3A0A075B625 Gm25168-201ENSMUST00000104189 132 ntBASIC0.15□□□□□ -2.39
Trav4d-3A0A075B625 Gm16431-201ENSMUST00000117454 431 ntBASIC0.15□□□□□ -2.39
Trav4d-3A0A075B625 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC0.15□□□□□ -2.39
Trav4d-3A0A075B625 Gm11862-201ENSMUST00000119678 659 ntBASIC0.15□□□□□ -2.39
Trav4d-3A0A075B625 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.15□□□□□ -2.39
Trav4d-3A0A075B625 Gm16373-201ENSMUST00000129517 303 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 159.9 ms