Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm25500-201ENSMUST00000104426 123 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm14852-201ENSMUST00000120065 647 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm7327-201ENSMUST00000120925 652 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm14287-201ENSMUST00000121060 117 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm14564-201ENSMUST00000122159 294 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm24997-201ENSMUST00000157910 105 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm25982-201ENSMUST00000157920 101 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm24082-201ENSMUST00000175175 83 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm27470-201ENSMUST00000184070 210 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm29229-201ENSMUST00000188874 323 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm38238-201ENSMUST00000194334 346 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm45445-201ENSMUST00000209586 232 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Mir423-201ENSMUST00000083584 109 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.41□□□□□ -2.02
H2afb1S4R1E0 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
H2afb1S4R1E0 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm22115-201ENSMUST00000103976 133 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm23923-201ENSMUST00000104108 133 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Snora36b-201ENSMUST00000104383 132 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm13903-201ENSMUST00000120945 193 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm22037-201ENSMUST00000157280 296 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm27510-201ENSMUST00000158214 64 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm24879-201ENSMUST00000158386 143 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm6788-201ENSMUST00000166459 270 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm10105-201ENSMUST00000184601 270 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm27624-201ENSMUST00000185047 177 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm7329-201ENSMUST00000185915 210 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm43669-201ENSMUST00000198229 436 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm43529-201ENSMUST00000199178 412 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm45860-201ENSMUST00000212700 334 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm26164-201ENSMUST00000083793 104 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm25207-201ENSMUST00000093745 107 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
H2afb1S4R1E0 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
H2afb1S4R1E0 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm11065-201ENSMUST00000111462 228 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 DQ267100-201ENSMUST00000122600 72 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm2830-201ENSMUST00000140330 385 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm23169-201ENSMUST00000157157 112 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm24681-201ENSMUST00000158760 107 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm23268-201ENSMUST00000175494 78 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Mir6402-201ENSMUST00000183406 80 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Mir6371-201ENSMUST00000184470 111 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm19202-201ENSMUST00000198096 808 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm6615-201ENSMUST00000199426 631 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm44478-201ENSMUST00000204875 114 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Gm45673-201ENSMUST00000210293 358 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
H2afb1S4R1E0 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm6071-201ENSMUST00000119561 440 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm22718-201ENSMUST00000122701 315 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm22322-201ENSMUST00000157151 111 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm24905-201ENSMUST00000158129 104 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm23024-201ENSMUST00000158770 292 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm17166-201ENSMUST00000172006 431 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm29231-201ENSMUST00000179850 319 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm34073-201ENSMUST00000195736 212 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm43402-201ENSMUST00000197159 159 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm42925-201ENSMUST00000197359 285 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm43624-201ENSMUST00000197368 180 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm45288-201ENSMUST00000210236 151 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Gm4945-201ENSMUST00000075152 453 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Snord14d-201ENSMUST00000083424 86 ntBASIC2.38□□□□□ -2.03
H2afb1S4R1E0 Mir323-201ENSMUST00000083683 86 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms