Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AC142113.2-201ENSMUST00000217425 748 ntBASIC0.56□□□□□ -2.32
Scn11aQ9R053 Gm11429-201ENSMUST00000119089 144 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Mir1949-201ENSMUST00000157434 141 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm20794-201ENSMUST00000177626 628 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Mir6399-201ENSMUST00000184050 84 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm28356-202ENSMUST00000187566 858 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm20885-201ENSMUST00000190192 654 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm33571-201ENSMUST00000193271 657 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm36866-201ENSMUST00000193343 657 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm36047-201ENSMUST00000193659 657 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm20857-201ENSMUST00000194766 657 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm20858-201ENSMUST00000195459 657 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm30638-201ENSMUST00000195570 656 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm24385-201ENSMUST00000122694 350 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm17991-201ENSMUST00000208139 297 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm22293-201ENSMUST00000083314 109 ntBASIC0.55□□□□□ -2.32
Scn11aQ9R053 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm14885-201ENSMUST00000117969 496 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.54□□□□□ -2.32
Scn11aQ9R053 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm24020-201ENSMUST00000180156 108 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm27999-201ENSMUST00000183539 193 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm28912-201ENSMUST00000189001 234 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm38323-201ENSMUST00000192450 210 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm42672-201ENSMUST00000197821 352 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm43493-201ENSMUST00000199837 202 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm44727-201ENSMUST00000204225 451 ntBASIC0.54□□□□□ -2.32
Scn11aQ9R053 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.53□□□□□ -2.32
Scn11aQ9R053 Gm25544-201ENSMUST00000122676 120 ntBASIC0.53□□□□□ -2.32
Scn11aQ9R053 Gm25718-201ENSMUST00000158632 118 ntBASIC0.53□□□□□ -2.32
Scn11aQ9R053 Gm3025-201ENSMUST00000163454 489 ntBASIC0.53□□□□□ -2.32
Scn11aQ9R053 Gm3111-201ENSMUST00000167426 490 ntBASIC0.53□□□□□ -2.32
Scn11aQ9R053 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.53□□□□□ -2.32
Scn11aQ9R053 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Scn11aQ9R053 Gm13672-201ENSMUST00000117554 459 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm24903-201ENSMUST00000158131 126 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm22074-201ENSMUST00000158595 113 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm45316-201ENSMUST00000210128 162 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm11351-202ENSMUST00000225724 478 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm44482-201ENSMUST00000199232 103 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Gm23247-201ENSMUST00000083373 107 ntBASIC0.52□□□□□ -2.33
Scn11aQ9R053 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Scn11aQ9R053 Gm6461-201ENSMUST00000120015 633 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 Gm14577-201ENSMUST00000121134 256 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 Gm27761-201ENSMUST00000184091 131 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 Gm45366-201ENSMUST00000209828 384 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 Gm4921-201ENSMUST00000219804 992 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 AC101945.3-201ENSMUST00000226568 153 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Scn11aQ9R053 Gm25128-201ENSMUST00000083339 76 ntBASIC0.51□□□□□ -2.33
Scn11aQ9R053 Gm15037-201ENSMUST00000120358 259 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm45023-201ENSMUST00000207951 379 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm24959-201ENSMUST00000157924 146 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm29299-201ENSMUST00000185609 923 ntBASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Scn11aQ9R053 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 155.5 ms