Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm26239-201ENSMUST00000178842 107 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm22367-201ENSMUST00000178930 132 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm21894-201ENSMUST00000179631 546 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm24267-201ENSMUST00000179841 107 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm37438-201ENSMUST00000192813 393 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm43810-201ENSMUST00000201018 232 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.77□□□□□ -2.13
Trem1Q9JKE2 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm24292-201ENSMUST00000082888 107 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
Trem1Q9JKE2 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm12412-201ENSMUST00000121867 328 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.76□□□□□ -2.13
Trem1Q9JKE2 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm24958-201ENSMUST00000158009 97 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm22538-201ENSMUST00000158169 299 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm24768-201ENSMUST00000158512 94 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm26215-201ENSMUST00000158584 139 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm22192-201ENSMUST00000175128 85 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Mir3076-201ENSMUST00000175415 60 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Mir3965-201ENSMUST00000175570 69 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm25457-201ENSMUST00000179509 107 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm24518-201ENSMUST00000180275 94 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm9022-202ENSMUST00000183285 483 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Mir6975-201ENSMUST00000184879 61 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm10193-201ENSMUST00000188288 231 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Trem1Q9JKE2 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm25632-201ENSMUST00000083112 85 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Gm23462-201ENSMUST00000083264 104 ntBASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trem1Q9JKE2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm12393-201ENSMUST00000117084 848 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm25625-201ENSMUST00000157221 96 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm22768-201ENSMUST00000158366 153 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm17072-201ENSMUST00000166673 658 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm24573-201ENSMUST00000175499 112 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm25933-201ENSMUST00000178943 108 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Mir6341-201ENSMUST00000183490 121 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm29657-201ENSMUST00000189807 342 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm44666-201ENSMUST00000208544 391 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.75□□□□□ -2.13
Trem1Q9JKE2 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Gm10360-201ENSMUST00000097219 272 ntBASIC1.75□□□□□ -2.13
Trem1Q9JKE2 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trem1Q9JKE2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm15077-201ENSMUST00000122344 362 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm23184-201ENSMUST00000122594 131 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm23172-201ENSMUST00000157160 124 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm22386-201ENSMUST00000158192 129 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm25162-201ENSMUST00000158906 159 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm28560-201ENSMUST00000186091 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm28334-201ENSMUST00000186653 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm28495-201ENSMUST00000188452 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm28232-201ENSMUST00000188683 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm28481-201ENSMUST00000189231 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm29059-201ENSMUST00000191534 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm37765-201ENSMUST00000192395 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm37237-201ENSMUST00000192893 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm36968-201ENSMUST00000193737 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm38290-201ENSMUST00000195238 315 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Mir3961-201ENSMUST00000198795 59 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm42475-201ENSMUST00000201212 295 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Gm26126-201ENSMUST00000083188 164 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Mir429-201ENSMUST00000083493 83 ntBASIC1.74□□□□□ -2.13
Trem1Q9JKE2 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm23803-201ENSMUST00000104610 132 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm15010-201ENSMUST00000117153 407 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm8858-201ENSMUST00000118259 342 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm7916-201ENSMUST00000120325 456 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm22338-201ENSMUST00000157715 129 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm23043-201ENSMUST00000157890 109 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm7953-201ENSMUST00000168278 469 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm22800-201ENSMUST00000175627 94 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm44393-201ENSMUST00000197418 138 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm44256-201ENSMUST00000203304 335 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm44011-201ENSMUST00000203336 394 ntBASIC1.73□□□□□ -2.13
Trem1Q9JKE2 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms