Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trem3Q9JKE1 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm23907-201ENSMUST00000104595 189 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm23429-201ENSMUST00000122486 149 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm6956-201ENSMUST00000134724 546 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm26177-201ENSMUST00000178683 107 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Mir6335-201ENSMUST00000184081 98 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Trdv3-201ENSMUST00000198551 309 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm9068-201ENSMUST00000217393 455 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.04□□□□□ -2.24
Trem3Q9JKE1 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm22997-201ENSMUST00000082845 107 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm23645-201ENSMUST00000083228 108 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm23042-201ENSMUST00000083866 101 ntBASIC1.04□□□□□ -2.24
Trem3Q9JKE1 Gm25313-201ENSMUST00000101817 116 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm23202-201ENSMUST00000104376 129 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trem3Q9JKE1 AA413626-201ENSMUST00000121125 494 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm23956-201ENSMUST00000157211 119 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm23048-201ENSMUST00000157237 129 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm27396-201ENSMUST00000157708 58 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm22338-201ENSMUST00000157715 129 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm22768-201ENSMUST00000158366 153 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm24573-201ENSMUST00000175499 112 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm23287-201ENSMUST00000179427 116 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm23143-201ENSMUST00000180137 116 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Mir6406-201ENSMUST00000183592 120 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm27428-201ENSMUST00000184289 110 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm44564-201ENSMUST00000207985 180 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm45387-201ENSMUST00000209792 632 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm18488-201ENSMUST00000215082 364 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm26328-201ENSMUST00000082821 107 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm24871-201ENSMUST00000083099 116 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm26265-201ENSMUST00000083277 135 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm25794-201ENSMUST00000083286 107 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm23733-201ENSMUST00000083750 106 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Rnu5g-201ENSMUST00000093721 116 ntBASIC1.03□□□□□ -2.24
Trem3Q9JKE1 Gm25759-201ENSMUST00000103988 129 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm15452-201ENSMUST00000119877 240 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm14852-201ENSMUST00000120065 647 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm14428-201ENSMUST00000120408 822 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm15167-201ENSMUST00000121997 187 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm22389-201ENSMUST00000158193 301 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm27711-201ENSMUST00000183802 118 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Mir6917-201ENSMUST00000184111 61 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm43723-201ENSMUST00000196886 189 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm42960-201ENSMUST00000202160 241 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm44554-201ENSMUST00000208738 147 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm45296-201ENSMUST00000209625 205 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm7692-201ENSMUST00000213534 409 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm46994-201ENSMUST00000221523 219 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm5955-201ENSMUST00000222712 219 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Ear14-201ENSMUST00000049559 468 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Gm10780-201ENSMUST00000099459 285 ntBASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trem3Q9JKE1 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Gm22678-201ENSMUST00000116974 101 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Gm14882-201ENSMUST00000117216 218 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Gm26049-201ENSMUST00000157313 108 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Gm21978-201ENSMUST00000179696 377 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Gm38044-201ENSMUST00000192964 487 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Mir1291-201ENSMUST00000199842 117 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.01□□□□□ -2.25
Trem3Q9JKE1 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Gm24610-201ENSMUST00000083270 109 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.01□□□□□ -2.25
Trem3Q9JKE1 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm14943-201ENSMUST00000118056 546 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm14359-201ENSMUST00000118883 424 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm24839-201ENSMUST00000122602 107 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm25047-201ENSMUST00000122667 104 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm15274-201ENSMUST00000131442 291 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm21979-201ENSMUST00000139887 291 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm9498-201ENSMUST00000140849 291 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm14368-201ENSMUST00000145305 415 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm15259-201ENSMUST00000151262 291 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm23983-201ENSMUST00000157142 114 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm24419-201ENSMUST00000157875 332 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm22663-201ENSMUST00000158721 102 ntBASIC1□□□□□ -2.25
Trem3Q9JKE1 Gm24177-201ENSMUST00000158927 131 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms