Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm7837-201ENSMUST00000190873 412 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm1833-201ENSMUST00000191608 682 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm34073-201ENSMUST00000195736 212 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm43355-201ENSMUST00000196541 346 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm44966-201ENSMUST00000208096 157 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm23517-201ENSMUST00000082830 192 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm25698-201ENSMUST00000082897 107 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm13581-201ENSMUST00000120675 278 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm13903-201ENSMUST00000120945 193 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm14972-201ENSMUST00000121780 364 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm13409-201ENSMUST00000122072 546 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm23586-201ENSMUST00000157657 123 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm24879-201ENSMUST00000158386 143 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm37128-201ENSMUST00000192599 232 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm5023-201ENSMUST00000217442 587 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm46233-201ENSMUST00000217831 449 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim54Q9ERP3 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Trim54Q9ERP3 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm15896-201ENSMUST00000118045 440 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm11253-201ENSMUST00000118486 201 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm7327-201ENSMUST00000120925 652 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm25781-201ENSMUST00000122527 84 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm23559-201ENSMUST00000157824 103 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Mir3092-201ENSMUST00000174954 96 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm42578-201ENSMUST00000199960 194 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm34314-201ENSMUST00000203622 367 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm45687-201ENSMUST00000209454 155 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm45704-201ENSMUST00000212582 403 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.08□□□□□ -1.92
Trim54Q9ERP3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim54Q9ERP3 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm22674-201ENSMUST00000104413 131 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm25500-201ENSMUST00000104426 123 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm15029-201ENSMUST00000119742 199 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm25325-201ENSMUST00000122559 86 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm28534-201ENSMUST00000187744 676 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm29229-201ENSMUST00000188874 323 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm44524-201ENSMUST00000203899 271 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm44718-201ENSMUST00000206886 359 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm23738-201ENSMUST00000082828 171 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm23727-201ENSMUST00000083352 164 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim54Q9ERP3 Mir701-201ENSMUST00000102208 109 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm15714-201ENSMUST00000117168 250 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm15282-201ENSMUST00000117707 300 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm13355-201ENSMUST00000117996 317 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm12954-201ENSMUST00000118610 611 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm14980-201ENSMUST00000121247 736 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm26255-201ENSMUST00000122492 103 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms