Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.57□□□□□ -2.16
Lima1Q9ERG0 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm24582-201ENSMUST00000103967 103 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm25563-201ENSMUST00000104603 74 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm26414-201ENSMUST00000157674 269 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm25557-201ENSMUST00000158084 315 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm24713-201ENSMUST00000178850 107 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm24897-201ENSMUST00000179033 107 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm25448-201ENSMUST00000180065 107 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Mir6335-201ENSMUST00000184081 98 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm45240-201ENSMUST00000211437 674 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm45730-201ENSMUST00000212560 395 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm9973-202ENSMUST00000220926 166 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm24406-201ENSMUST00000083026 128 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm23848-201ENSMUST00000083826 106 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.56□□□□□ -2.16
Lima1Q9ERG0 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm22091-201ENSMUST00000116908 127 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm22584-201ENSMUST00000177935 92 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm29231-201ENSMUST00000179850 319 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm11395-201ENSMUST00000181011 499 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Mir6406-201ENSMUST00000183592 120 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Mir6399-201ENSMUST00000184050 84 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm28383-201ENSMUST00000187563 139 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm28438-201ENSMUST00000188299 345 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm29262-201ENSMUST00000190084 196 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.55□□□□□ -2.16
Lima1Q9ERG0 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm44384-201ENSMUST00000200208 114 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Gm26922-201ENSMUST00000082687 72 ntBASIC1.55□□□□□ -2.16
Lima1Q9ERG0 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm23744-201ENSMUST00000104231 149 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm26147-201ENSMUST00000104479 114 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm13714-201ENSMUST00000117313 221 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm16129-201ENSMUST00000152628 486 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm23172-201ENSMUST00000157160 124 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm23956-201ENSMUST00000157211 119 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm26181-201ENSMUST00000157687 106 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm23078-201ENSMUST00000157848 148 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm26271-201ENSMUST00000158349 104 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm22665-201ENSMUST00000158720 275 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm23042-201ENSMUST00000083866 101 ntBASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Lima1Q9ERG0 Gm25485-201ENSMUST00000104120 132 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm13432-201ENSMUST00000118861 241 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm15309-201ENSMUST00000121644 240 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm25392-201ENSMUST00000157335 297 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm24784-201ENSMUST00000157640 62 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm23381-201ENSMUST00000157676 94 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm24053-201ENSMUST00000158620 105 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm27265-201ENSMUST00000183559 77 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm42805-201ENSMUST00000196158 276 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm45071-201ENSMUST00000205353 571 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Lima1Q9ERG0 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.53□□□□□ -2.16
Lima1Q9ERG0 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Olfr575-201ENSMUST00000084812 957 ntBASIC1.53□□□□□ -2.16
Lima1Q9ERG0 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.52□□□□□ -2.17
Lima1Q9ERG0 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm6587-201ENSMUST00000120219 613 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm15115-201ENSMUST00000121145 264 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm24839-201ENSMUST00000122602 107 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm24895-201ENSMUST00000122742 74 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm22143-201ENSMUST00000157401 203 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm25243-201ENSMUST00000174912 207 ntBASIC1.52□□□□□ -2.17
Lima1Q9ERG0 Gm25361-201ENSMUST00000179358 76 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 128.8 ms