Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Gm22247-201ENSMUST00000082476 131 ntBASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Gm22658-201ENSMUST00000104196 155 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm13510-201ENSMUST00000118659 429 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm26186-201ENSMUST00000157689 125 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm23078-201ENSMUST00000157848 148 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Mir1927-201ENSMUST00000158579 109 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm27520-201ENSMUST00000184872 81 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm22779-201ENSMUST00000104085 107 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm14868-201ENSMUST00000117840 216 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm12155-201ENSMUST00000121267 160 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm13409-201ENSMUST00000122072 546 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm24630-201ENSMUST00000122768 106 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm24925-201ENSMUST00000178157 107 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm28383-201ENSMUST00000187563 139 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm29262-201ENSMUST00000190084 196 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm43550-201ENSMUST00000200597 303 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm44041-201ENSMUST00000203678 396 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm32300-201ENSMUST00000221735 515 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm24445-201ENSMUST00000083981 107 ntBASIC2.35□□□□□ -2.03
Scn4aQ9ER60 Gm23708-201ENSMUST00000104367 123 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm12191-201ENSMUST00000118307 348 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm13541-201ENSMUST00000119519 283 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm9703-201ENSMUST00000119573 343 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm24393-201ENSMUST00000158135 97 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm22665-201ENSMUST00000158720 275 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Mir5099-201ENSMUST00000175257 74 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm28474-201ENSMUST00000188501 315 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm43652-201ENSMUST00000196219 675 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm43991-201ENSMUST00000203751 274 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Gm18188-201ENSMUST00000219386 478 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Mir10b-201ENSMUST00000083566 68 ntBASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Scn4aQ9ER60 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm13343-201ENSMUST00000116474 105 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm12370-201ENSMUST00000117809 604 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm24784-201ENSMUST00000157640 62 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm23783-201ENSMUST00000157941 102 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm37757-201ENSMUST00000193072 210 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm38333-201ENSMUST00000193608 604 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Mir219b-201ENSMUST00000198317 65 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm45101-201ENSMUST00000208327 232 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm14073-201ENSMUST00000117344 381 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm14923-201ENSMUST00000118270 155 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm9440-201ENSMUST00000119667 539 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm23137-201ENSMUST00000157559 107 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm24677-201ENSMUST00000158755 150 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm28283-201ENSMUST00000185509 178 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm19089-201ENSMUST00000197207 613 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Gm18160-201ENSMUST00000214279 827 ntBASIC2.33□□□□□ -2.04
Scn4aQ9ER60 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Gm14852-201ENSMUST00000120065 647 ntBASIC2.32□□□□□ -2.04
Scn4aQ9ER60 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Gm9071-201ENSMUST00000165915 474 ntBASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.32□□□□□ -2.04
Scn4aQ9ER60 Gm12096-201ENSMUST00000121149 829 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm25283-201ENSMUST00000157272 77 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm5967-201ENSMUST00000172723 494 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm22565-201ENSMUST00000175540 69 ntBASIC2.31□□□□□ -2.04
Scn4aQ9ER60 Gm24464-201ENSMUST00000179697 107 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms