Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm20794-201ENSMUST00000177626 628 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm28356-202ENSMUST00000187566 858 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm20885-201ENSMUST00000190192 654 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm33571-201ENSMUST00000193271 657 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm36866-201ENSMUST00000193343 657 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm36047-201ENSMUST00000193659 657 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm20857-201ENSMUST00000194766 657 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm20858-201ENSMUST00000195459 657 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm30638-201ENSMUST00000195570 656 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm17991-201ENSMUST00000208139 297 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Mir208a-201ENSMUST00000083498 83 ntBASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm13359-201ENSMUST00000119000 695 ntBASIC0.65□□□□□ -2.3
Cpsf1Q9EPU4 Gm14623-201ENSMUST00000121398 603 ntBASIC0.65□□□□□ -2.3
Cpsf1Q9EPU4 Gm14411-201ENSMUST00000121798 914 ntBASIC0.65□□□□□ -2.3
Cpsf1Q9EPU4 Gm11965-201ENSMUST00000122017 277 ntBASIC0.65□□□□□ -2.3
Cpsf1Q9EPU4 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.65□□□□□ -2.3
Cpsf1Q9EPU4 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Cpsf1Q9EPU4 Gm22088-201ENSMUST00000158341 117 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm24925-201ENSMUST00000178157 107 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Mir7077-201ENSMUST00000183991 57 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm44828-201ENSMUST00000203745 106 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm44254-201ENSMUST00000204184 322 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm45071-201ENSMUST00000205353 571 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm24152-201ENSMUST00000082764 163 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm15497-201ENSMUST00000119137 551 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm14360-201ENSMUST00000120670 393 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm24915-201ENSMUST00000157288 78 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm25332-201ENSMUST00000158038 105 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm27980-201ENSMUST00000184094 169 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm22293-201ENSMUST00000083314 109 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Snora34-201ENSMUST00000083402 138 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.64□□□□□ -2.31
Cpsf1Q9EPU4 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm9001-201ENSMUST00000121642 399 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm24385-201ENSMUST00000122694 350 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm16404-201ENSMUST00000177739 468 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm7958-201ENSMUST00000178255 468 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm23933-201ENSMUST00000178405 79 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm26378-201ENSMUST00000179093 107 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm7950-201ENSMUST00000179633 468 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm14598-201ENSMUST00000180109 468 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm14625-201ENSMUST00000180231 468 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm27974-201ENSMUST00000183415 105 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm27640-201ENSMUST00000184580 147 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm29397-201ENSMUST00000185205 333 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm28912-201ENSMUST00000189001 234 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.63□□□□□ -2.31
Cpsf1Q9EPU4 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Gm14795-201ENSMUST00000118461 471 ntBASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Gm25391-201ENSMUST00000157342 134 ntBASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Gm43432-201ENSMUST00000196352 121 ntBASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Gm18268-201ENSMUST00000208445 943 ntBASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Gm44657-201ENSMUST00000208568 450 ntBASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Mir224-201ENSMUST00000083608 82 ntBASIC0.62□□□□□ -2.31
Cpsf1Q9EPU4 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Cpsf1Q9EPU4 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Cpsf1Q9EPU4 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.61□□□□□ -2.31
Cpsf1Q9EPU4 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
Cpsf1Q9EPU4 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Cpsf1Q9EPU4 Gm44459-201ENSMUST00000203926 160 ntBASIC0.61□□□□□ -2.31
Cpsf1Q9EPU4 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm23531-201ENSMUST00000104567 68 ntBASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm24476-201ENSMUST00000157437 131 ntBASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm24768-201ENSMUST00000158512 94 ntBASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm23704-201ENSMUST00000158844 340 ntBASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm16399-201ENSMUST00000181423 219 ntBASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm43944-201ENSMUST00000205220 120 ntBASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.6□□□□□ -2.31
Cpsf1Q9EPU4 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Gm25333-201ENSMUST00000158035 246 ntBASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Cpsf1Q9EPU4 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms