Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Upf1Q9EPU0 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Upf1Q9EPU0 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Upf1Q9EPU0 Gm7123-201ENSMUST00000117647 213 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm14389-201ENSMUST00000140453 241 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm22378-201ENSMUST00000157481 111 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm22521-201ENSMUST00000158272 134 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm23355-201ENSMUST00000177614 107 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm23148-201ENSMUST00000180367 107 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm19620-201ENSMUST00000195972 434 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm42672-201ENSMUST00000197821 352 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm43583-201ENSMUST00000199235 303 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm46997-201ENSMUST00000222108 217 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm25258-201ENSMUST00000083049 107 ntBASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Upf1Q9EPU0 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Gm24282-201ENSMUST00000104232 66 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Mir5118-201ENSMUST00000175551 67 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Gm37713-201ENSMUST00000191746 198 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Gm38238-201ENSMUST00000194334 346 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Mir3535-201ENSMUST00000197651 147 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Snord21-201ENSMUST00000082519 94 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upf1Q9EPU0 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.14□□□□□ -1.75
Upf1Q9EPU0 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm23011-201ENSMUST00000104148 132 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm15215-201ENSMUST00000117773 489 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm14877-201ENSMUST00000119803 478 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm13729-201ENSMUST00000120328 406 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm25808-201ENSMUST00000122784 284 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm17117-201ENSMUST00000163665 299 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm24818-201ENSMUST00000175093 161 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm37417-201ENSMUST00000195257 454 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 AC155839.1-201ENSMUST00000200105 147 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm43600-201ENSMUST00000202134 223 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Gm22685-201ENSMUST00000082848 106 ntBASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upf1Q9EPU0 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm15896-201ENSMUST00000118045 440 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm22666-201ENSMUST00000158717 164 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm23775-201ENSMUST00000158991 249 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm16289-201ENSMUST00000162079 183 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm20651-201ENSMUST00000177219 329 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm20693-201ENSMUST00000177431 211 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Mir6371-201ENSMUST00000184470 111 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm9377-201ENSMUST00000207227 623 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upf1Q9EPU0 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Gm12042-201ENSMUST00000120479 301 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Gm25107-201ENSMUST00000122472 129 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Gm24629-201ENSMUST00000122762 89 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Gm23829-201ENSMUST00000157392 270 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Gm27783-201ENSMUST00000183534 105 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Gm38060-201ENSMUST00000194822 464 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Gm42578-201ENSMUST00000199960 194 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms