Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm26166-201ENSMUST00000083788 107 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm22353-201ENSMUST00000083918 136 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm7164-201ENSMUST00000117503 450 ntBASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm12646-201ENSMUST00000119144 238 ntBASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm13368-201ENSMUST00000122443 430 ntBASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm37599-201ENSMUST00000193067 489 ntBASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm38333-201ENSMUST00000193608 604 ntBASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm37119-201ENSMUST00000195691 389 ntBASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm45252-201ENSMUST00000211579 397 ntBASIC1.84□□□□□ -2.11
Cdc40Q9DC48 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.84□□□□□ -2.11
Cdc40Q9DC48 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.84□□□□□ -2.12
Cdc40Q9DC48 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Mir582-201ENSMUST00000103758 81 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm24582-201ENSMUST00000103967 103 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm15714-201ENSMUST00000117168 250 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm11352-201ENSMUST00000119264 517 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm24910-201ENSMUST00000157289 272 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm25488-201ENSMUST00000158728 118 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm25836-201ENSMUST00000158918 123 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm8114-201ENSMUST00000172225 484 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm23619-201ENSMUST00000178411 94 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm25474-201ENSMUST00000179052 94 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm22047-201ENSMUST00000179176 94 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm28838-201ENSMUST00000186338 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm29635-201ENSMUST00000187221 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm29026-201ENSMUST00000187787 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm28797-201ENSMUST00000188543 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm28855-201ENSMUST00000188680 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm28705-201ENSMUST00000189548 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm28939-201ENSMUST00000190351 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm28223-201ENSMUST00000190469 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm29092-201ENSMUST00000190768 315 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm38280-201ENSMUST00000192610 158 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm44825-201ENSMUST00000207557 150 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm44598-201ENSMUST00000207566 150 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.83□□□□□ -2.12
Cdc40Q9DC48 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm26446-201ENSMUST00000082455 103 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Mir301-201ENSMUST00000083655 86 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.83□□□□□ -2.12
Cdc40Q9DC48 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm23010-201ENSMUST00000104151 126 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm22494-201ENSMUST00000104495 128 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm14793-201ENSMUST00000118739 311 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm11849-201ENSMUST00000121293 261 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm25109-201ENSMUST00000122474 114 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm25113-201ENSMUST00000157185 143 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm23332-201ENSMUST00000157424 275 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm26345-201ENSMUST00000157534 120 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm23813-201ENSMUST00000175153 77 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm18417-201ENSMUST00000176564 648 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm6660-201ENSMUST00000179149 468 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm9022-202ENSMUST00000183285 483 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm37550-201ENSMUST00000193230 463 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm45240-201ENSMUST00000211437 674 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm2628-201ENSMUST00000218019 426 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm25788-201ENSMUST00000082721 131 ntBASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cdc40Q9DC48 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Mdga2-203ENSMUST00000113942 423 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Gm14852-201ENSMUST00000120065 647 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.81□□□□□ -2.12
Cdc40Q9DC48 Gm28745-201ENSMUST00000190069 305 ntBASIC1.81□□□□□ -2.12
Cdc40Q9DC48 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms