Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Mir3964-201ENSMUST00000174898 74 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm28838-201ENSMUST00000186338 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm29635-201ENSMUST00000187221 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm29026-201ENSMUST00000187787 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm28797-201ENSMUST00000188543 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm28855-201ENSMUST00000188680 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm28705-201ENSMUST00000189548 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm28939-201ENSMUST00000190351 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm28223-201ENSMUST00000190469 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm29092-201ENSMUST00000190768 315 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm32175-201ENSMUST00000193641 346 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.59□□□□□ -2.16
Ccdc3Q9D6Y1 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.59□□□□□ -2.16
Ccdc3Q9D6Y1 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm6660-201ENSMUST00000179149 468 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm4076-201ENSMUST00000179230 965 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm27326-201ENSMUST00000183504 95 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm9251-201ENSMUST00000197202 628 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm43531-201ENSMUST00000200676 1114 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm25788-201ENSMUST00000082721 131 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Mir19a-201ENSMUST00000083482 82 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr575-201ENSMUST00000084812 957 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Mir465-201ENSMUST00000093563 74 ntBASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Ccdc3Q9D6Y1 Gm26396-201ENSMUST00000104093 132 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm13903-201ENSMUST00000120945 193 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm28383-201ENSMUST00000187563 139 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm29262-201ENSMUST00000190084 196 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm6369-201ENSMUST00000069626 412 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm25131-201ENSMUST00000082653 151 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm26166-201ENSMUST00000083788 107 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Snora33-201ENSMUST00000093556 129 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.57□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm15110-201ENSMUST00000117545 881 ntBASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm14774-201ENSMUST00000117857 536 ntBASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm14428-201ENSMUST00000120408 822 ntBASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm23332-201ENSMUST00000157424 275 ntBASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm24713-201ENSMUST00000178850 107 ntBASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm25448-201ENSMUST00000180065 107 ntBASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm44825-201ENSMUST00000207557 150 ntBASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm44598-201ENSMUST00000207566 150 ntBASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ccdc3Q9D6Y1 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm24582-201ENSMUST00000103967 103 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Mir466n-201ENSMUST00000104798 94 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm22091-201ENSMUST00000116908 127 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm11352-201ENSMUST00000119264 517 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm11786-201ENSMUST00000120799 155 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm26181-201ENSMUST00000157687 106 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm27722-201ENSMUST00000183908 76 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Mir6335-201ENSMUST00000184081 98 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm29167-201ENSMUST00000190024 377 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm44392-201ENSMUST00000196758 115 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm44395-201ENSMUST00000197056 153 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Mir107-201ENSMUST00000083660 87 ntBASIC1.55□□□□□ -2.16
Ccdc3Q9D6Y1 Gm23042-201ENSMUST00000083866 101 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 156.6 ms