Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm22036-201ENSMUST00000157279 215 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm22845-201ENSMUST00000157712 104 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm25603-201ENSMUST00000158361 105 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm23638-201ENSMUST00000175073 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm23158-201ENSMUST00000175076 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm22907-201ENSMUST00000175198 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm22625-201ENSMUST00000175382 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm22875-201ENSMUST00000175449 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm25197-201ENSMUST00000175516 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm27857-201ENSMUST00000176930 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm26268-201ENSMUST00000177685 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm22108-201ENSMUST00000177961 106 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm23681-201ENSMUST00000178821 126 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm24798-201ENSMUST00000179334 106 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm27580-201ENSMUST00000183666 149 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm27940-201ENSMUST00000184449 98 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm4644-201ENSMUST00000197587 400 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 mt-Tf-201ENSMUST00000082387 68 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm24356-201ENSMUST00000082859 106 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm23464-201ENSMUST00000083145 147 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Snora31-201ENSMUST00000083213 130 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Trim42Q9D2H5 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm24282-201ENSMUST00000104232 66 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm22373-201ENSMUST00000104584 89 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm13432-201ENSMUST00000118861 241 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm24141-201ENSMUST00000122776 115 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm22225-201ENSMUST00000157358 278 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm25069-201ENSMUST00000175238 86 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Mir7056-201ENSMUST00000183776 59 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Trbv6-201ENSMUST00000193743 276 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm17951-201ENSMUST00000198536 496 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 AC154527.5-201ENSMUST00000224448 496 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim42Q9D2H5 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Mir872-201ENSMUST00000104728 81 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Mdga2-203ENSMUST00000113942 423 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm13343-201ENSMUST00000116474 105 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Mir1298-201ENSMUST00000116681 98 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm22320-201ENSMUST00000157149 312 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm24720-201ENSMUST00000157518 166 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm25424-201ENSMUST00000157612 58 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm26200-201ENSMUST00000180273 79 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Mir6383-201ENSMUST00000184545 116 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm28848-201ENSMUST00000189984 168 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm42774-201ENSMUST00000198854 283 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm45445-201ENSMUST00000209586 232 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm22576-201ENSMUST00000083733 104 ntBASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim42Q9D2H5 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.09□□□□□ -1.76
Trim42Q9D2H5 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Trim42Q9D2H5 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Trim42Q9D2H5 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms