Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Vps28Q9D1C8 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Vps28Q9D1C8 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Mir344c-201ENSMUST00000103919 92 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm11386-201ENSMUST00000117761 347 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm11285-201ENSMUST00000118443 322 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm15211-201ENSMUST00000118932 528 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm16218-201ENSMUST00000155424 388 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm25153-201ENSMUST00000157118 156 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm26105-201ENSMUST00000157253 190 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm24409-201ENSMUST00000157881 152 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm23016-201ENSMUST00000158431 62 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm26214-201ENSMUST00000158581 107 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm22891-201ENSMUST00000158641 164 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm7925-201ENSMUST00000166690 401 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm29134-201ENSMUST00000186579 126 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm28337-201ENSMUST00000190425 666 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm38311-201ENSMUST00000192945 165 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm33354-201ENSMUST00000195448 906 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm44754-201ENSMUST00000208155 400 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.73□□□□□ -1.97
Vps28Q9D1C8 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Vps28Q9D1C8 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.73□□□□□ -1.97
Vps28Q9D1C8 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Vps28Q9D1C8 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm26341-201ENSMUST00000104561 134 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm26247-201ENSMUST00000116702 91 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm22328-201ENSMUST00000158074 112 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm23476-201ENSMUST00000158881 274 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Mir6386-201ENSMUST00000183558 104 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.72□□□□□ -1.97
Vps28Q9D1C8 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm43510-201ENSMUST00000197922 353 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm44060-201ENSMUST00000204440 410 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.72□□□□□ -1.97
Vps28Q9D1C8 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.72□□□□□ -1.97
Vps28Q9D1C8 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.72□□□□□ -1.97
Vps28Q9D1C8 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.97
Vps28Q9D1C8 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm22656-201ENSMUST00000104199 171 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm26473-201ENSMUST00000116763 127 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm16242-201ENSMUST00000117741 334 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm11460-201ENSMUST00000118200 361 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm14770-201ENSMUST00000122197 312 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm7209-201ENSMUST00000122339 333 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm26149-201ENSMUST00000157432 108 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm24191-201ENSMUST00000157977 122 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm22416-201ENSMUST00000158590 88 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm22136-201ENSMUST00000158751 268 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm25119-201ENSMUST00000158815 88 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm17148-201ENSMUST00000164702 249 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm20718-201ENSMUST00000176058 259 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm37081-201ENSMUST00000192034 196 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.71□□□□□ -1.98
Vps28Q9D1C8 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.71□□□□□ -1.98
Vps28Q9D1C8 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.71□□□□□ -1.98
Vps28Q9D1C8 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm13331-201ENSMUST00000117500 448 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm12550-201ENSMUST00000118478 329 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm11512-201ENSMUST00000119669 663 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm13153-201ENSMUST00000120969 637 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm14821-201ENSMUST00000121975 435 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm24596-201ENSMUST00000122504 107 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm23829-201ENSMUST00000157392 270 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm22651-201ENSMUST00000157872 94 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm24584-201ENSMUST00000157972 107 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm25211-201ENSMUST00000177553 107 ntBASIC2.7□□□□□ -1.98
Vps28Q9D1C8 Gm24540-201ENSMUST00000177627 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms