Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm24581-201ENSMUST00000103962 133 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm11254-201ENSMUST00000122368 653 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm6956-201ENSMUST00000134724 546 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm22380-201ENSMUST00000157479 95 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm24084-201ENSMUST00000175173 137 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm28418-201ENSMUST00000186179 423 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm32033-201ENSMUST00000193483 339 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Mir3068-202ENSMUST00000197755 79 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm23925-201ENSMUST00000082471 132 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm26111-201ENSMUST00000083969 106 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.43□□□□□ -1.86
Ddx56Q9D0R4 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Mir669i-201ENSMUST00000117007 127 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm16533-201ENSMUST00000140035 228 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm26100-201ENSMUST00000157245 127 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm24914-201ENSMUST00000157285 313 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm23120-201ENSMUST00000157654 287 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm22534-201ENSMUST00000158173 104 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm8292-201ENSMUST00000162574 396 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm28002-201ENSMUST00000184832 100 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Mir6975-201ENSMUST00000184879 61 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm18433-202ENSMUST00000195682 196 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm37404-201ENSMUST00000195726 359 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm43899-201ENSMUST00000203675 246 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm9318-201ENSMUST00000222444 438 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm24147-201ENSMUST00000082763 144 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Gm25937-201ENSMUST00000083912 107 ntBASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ddx56Q9D0R4 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm23202-201ENSMUST00000104376 129 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm14296-202ENSMUST00000108931 750 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm15844-201ENSMUST00000118016 576 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm14307-201ENSMUST00000118930 291 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm14297-201ENSMUST00000129110 291 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm22722-201ENSMUST00000157467 132 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm22833-201ENSMUST00000158292 132 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm26400-201ENSMUST00000175012 85 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Mir6907-201ENSMUST00000183764 71 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm28647-201ENSMUST00000188416 197 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm28717-201ENSMUST00000189950 315 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Gm23041-201ENSMUST00000083868 106 ntBASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ddx56Q9D0R4 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ddx56Q9D0R4 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ddx56Q9D0R4 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm24504-201ENSMUST00000157679 100 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm25454-201ENSMUST00000157947 315 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm8338-201ENSMUST00000163928 363 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm6788-201ENSMUST00000166459 270 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm37923-201ENSMUST00000191624 161 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Gm45420-201ENSMUST00000211243 425 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Ddx56Q9D0R4 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ddx56Q9D0R4 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms