Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Mir3090-201ENSMUST00000175597 87 ntBASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Gm28627-201ENSMUST00000186141 453 ntBASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Gm29104-201ENSMUST00000186304 222 ntBASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Gm43193-201ENSMUST00000197732 441 ntBASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Gm34224-201ENSMUST00000204606 364 ntBASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.69□□□□□ -1.82
Ssu72Q9CY97 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Gm25481-201ENSMUST00000083221 158 ntBASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ssu72Q9CY97 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm23532-201ENSMUST00000104569 112 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm24586-201ENSMUST00000116695 89 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Mir1b-201ENSMUST00000117012 122 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm5396-201ENSMUST00000121222 532 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm22225-201ENSMUST00000157358 278 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm25863-201ENSMUST00000158249 329 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Mir669k-201ENSMUST00000177742 127 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm25673-201ENSMUST00000179957 127 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm27414-201ENSMUST00000185033 381 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm44354-201ENSMUST00000196017 143 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Gm18213-201ENSMUST00000207850 178 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Mir146-201ENSMUST00000083667 65 ntBASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ssu72Q9CY97 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Gm11204-201ENSMUST00000122438 147 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Gm27355-201ENSMUST00000185045 128 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Gm37431-201ENSMUST00000195102 111 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Gm5002-201ENSMUST00000207145 223 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ssu72Q9CY97 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ssu72Q9CY97 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm15714-201ENSMUST00000117168 250 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm14282-201ENSMUST00000119484 240 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm12858-201ENSMUST00000121913 208 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm22957-201ENSMUST00000122511 123 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm24959-201ENSMUST00000157924 146 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm22989-201ENSMUST00000158313 86 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm24086-201ENSMUST00000175171 98 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm27220-201ENSMUST00000183453 262 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm37617-201ENSMUST00000194309 159 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm45778-201ENSMUST00000211959 153 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm24356-201ENSMUST00000082859 106 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm22350-201ENSMUST00000083924 156 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.66□□□□□ -1.82
Ssu72Q9CY97 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Ssu72Q9CY97 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Ssu72Q9CY97 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ssu72Q9CY97 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.65□□□□□ -1.82
Ssu72Q9CY97 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ssu72Q9CY97 Gm14803-201ENSMUST00000117163 361 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Mir1967-201ENSMUST00000157789 82 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm25920-201ENSMUST00000158307 99 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm23053-201ENSMUST00000175136 96 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm6660-201ENSMUST00000179149 468 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm27285-201ENSMUST00000183875 127 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm29574-201ENSMUST00000186226 696 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm28159-201ENSMUST00000190296 696 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm42623-201ENSMUST00000197225 379 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm43220-201ENSMUST00000199299 282 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.65□□□□□ -1.83
Ssu72Q9CY97 Gm8820-201ENSMUST00000204077 571 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms