Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm22633-201ENSMUST00000179834 107 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm28838-201ENSMUST00000186338 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm29635-201ENSMUST00000187221 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm29026-201ENSMUST00000187787 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm28797-201ENSMUST00000188543 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm28855-201ENSMUST00000188680 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm28705-201ENSMUST00000189548 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm28939-201ENSMUST00000190351 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm28223-201ENSMUST00000190469 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm29092-201ENSMUST00000190768 315 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm43587-201ENSMUST00000199590 204 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm26379-202ENSMUST00000200225 132 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Mir7215-201ENSMUST00000200383 51 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.49□□□□□ -2.01
Smc1aQ9CU62 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm25586-201ENSMUST00000082499 112 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm22229-201ENSMUST00000082987 108 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm23472-201ENSMUST00000101806 191 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm12721-201ENSMUST00000120621 268 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm23324-201ENSMUST00000157421 131 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm24497-201ENSMUST00000177868 191 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm6660-201ENSMUST00000179149 468 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm25939-201ENSMUST00000179876 191 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm21673-201ENSMUST00000186640 436 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm29604-201ENSMUST00000187176 163 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm21135-201ENSMUST00000189023 436 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm44818-201ENSMUST00000206608 358 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm45240-201ENSMUST00000211437 674 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm23444-201ENSMUST00000082922 191 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.48□□□□□ -2.01
Smc1aQ9CU62 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm25094-201ENSMUST00000103992 131 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm12941-201ENSMUST00000117934 220 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm13804-201ENSMUST00000119552 172 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm13588-201ENSMUST00000120026 135 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm14852-201ENSMUST00000120065 647 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm11849-201ENSMUST00000121293 261 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm26401-201ENSMUST00000158502 76 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm18296-201ENSMUST00000192475 783 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm43708-201ENSMUST00000198857 961 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm42164-201ENSMUST00000198881 379 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Mir497-201ENSMUST00000200557 84 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm7039-201ENSMUST00000205138 346 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm6109-201ENSMUST00000223297 348 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Smc1aQ9CU62 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm15714-201ENSMUST00000117168 250 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm14670-201ENSMUST00000117327 337 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm14558-201ENSMUST00000117458 381 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm12225-201ENSMUST00000117995 298 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm13368-201ENSMUST00000122443 430 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm23548-201ENSMUST00000158963 106 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm25996-201ENSMUST00000175393 117 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm23379-201ENSMUST00000180026 107 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm23144-201ENSMUST00000180226 107 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Mir6997-201ENSMUST00000184313 71 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm44825-201ENSMUST00000207557 150 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm44598-201ENSMUST00000207566 150 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm26446-201ENSMUST00000082455 103 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Mir93-201ENSMUST00000083593 88 ntBASIC2.46□□□□□ -2.02
Smc1aQ9CU62 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Smc1aQ9CU62 Gm24582-201ENSMUST00000103967 103 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm26077-201ENSMUST00000104064 123 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm12550-201ENSMUST00000118478 329 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm6568-201ENSMUST00000122274 697 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm16510-201ENSMUST00000153501 249 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm25910-201ENSMUST00000157620 140 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm23068-201ENSMUST00000158239 293 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm24769-201ENSMUST00000158506 129 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm22166-201ENSMUST00000178419 121 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm23288-201ENSMUST00000179213 121 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Mir6406-201ENSMUST00000183592 120 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm28597-201ENSMUST00000187664 666 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm10193-201ENSMUST00000188288 231 ntBASIC2.45□□□□□ -2.02
Smc1aQ9CU62 Gm18775-201ENSMUST00000190763 586 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms