Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm15266-201ENSMUST00000119635 255 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm22037-201ENSMUST00000157280 296 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm25368-201ENSMUST00000158847 131 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm37361-201ENSMUST00000194345 132 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm7214-201ENSMUST00000222428 272 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm46389-201ENSMUST00000223199 392 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm25698-201ENSMUST00000082897 107 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm23246-201ENSMUST00000083371 67 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm23472-201ENSMUST00000101806 191 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm12053-201ENSMUST00000119022 252 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm22083-201ENSMUST00000157586 102 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm25454-201ENSMUST00000157947 315 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm16561-201ENSMUST00000163001 192 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm24497-201ENSMUST00000177868 191 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm25939-201ENSMUST00000179876 191 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm29950-201ENSMUST00000195273 237 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Mir6925-201ENSMUST00000197857 70 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Gm23444-201ENSMUST00000082922 191 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Mir127-201ENSMUST00000093568 70 ntBASIC2.45□□□□□ -2.02
Ccdc43Q9CR29 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm14848-201ENSMUST00000121850 467 ntBASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm26102-201ENSMUST00000157251 284 ntBASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm24885-201ENSMUST00000158783 270 ntBASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm8292-201ENSMUST00000162574 396 ntBASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm27490-201ENSMUST00000184754 128 ntBASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm42672-201ENSMUST00000197821 352 ntBASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.44□□□□□ -2.02
Ccdc43Q9CR29 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm12646-201ENSMUST00000119144 238 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm13409-201ENSMUST00000122072 546 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm23381-201ENSMUST00000157676 94 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm25711-201ENSMUST00000158633 128 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm37869-201ENSMUST00000193385 595 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm44083-201ENSMUST00000203114 337 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm45252-201ENSMUST00000211579 397 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm26328-201ENSMUST00000082821 107 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm25794-201ENSMUST00000083286 107 ntBASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ccdc43Q9CR29 Gm12393-201ENSMUST00000117084 848 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm16510-201ENSMUST00000153501 249 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm21978-201ENSMUST00000179696 377 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm27660-201ENSMUST00000184028 208 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm19694-201ENSMUST00000192364 505 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm37641-201ENSMUST00000193837 239 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc43Q9CR29 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Gm14215-201ENSMUST00000120578 221 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Gm25488-201ENSMUST00000158728 118 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Gm20689-201ENSMUST00000176033 279 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Gm20656-201ENSMUST00000176925 518 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Mir497-201ENSMUST00000200557 84 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Gm45730-201ENSMUST00000212560 395 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.41□□□□□ -2.02
Ccdc43Q9CR29 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Ccdc43Q9CR29 Gm25414-201ENSMUST00000101814 107 ntBASIC2.4□□□□□ -2.03
Ccdc43Q9CR29 Gm25376-201ENSMUST00000104340 133 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms