Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm24572-201ENSMUST00000175505 88 ntBASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 Gm32175-201ENSMUST00000193641 346 ntBASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 Gm42164-201ENSMUST00000198881 379 ntBASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 Snora33-201ENSMUST00000093556 129 ntBASIC1.51□□□□□ -2.17
RTRAFQ9CQE8 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm26424-201ENSMUST00000122530 104 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm22792-201ENSMUST00000157225 133 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm25413-201ENSMUST00000158544 312 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm22076-201ENSMUST00000158601 84 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm23196-201ENSMUST00000158806 107 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm25020-201ENSMUST00000178071 107 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm37727-201ENSMUST00000191637 819 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm44024-201ENSMUST00000203008 476 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm45240-201ENSMUST00000211437 674 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm22229-201ENSMUST00000082987 108 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Gm24268-201ENSMUST00000082990 110 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.5□□□□□ -2.17
RTRAFQ9CQE8 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm22831-201ENSMUST00000102473 109 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm23202-201ENSMUST00000104376 129 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm23981-201ENSMUST00000157136 106 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm25066-201ENSMUST00000158145 123 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm22527-201ENSMUST00000158816 106 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm26864-201ENSMUST00000181346 156 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm28900-201ENSMUST00000185232 156 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm35212-201ENSMUST00000196672 606 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Mir3068-202ENSMUST00000197755 79 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm43431-201ENSMUST00000198577 340 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm17906-201ENSMUST00000202480 901 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm44182-201ENSMUST00000204052 115 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm45658-201ENSMUST00000209197 580 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm6796-201ENSMUST00000211919 243 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm26228-201ENSMUST00000082512 107 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm25080-201ENSMUST00000082526 107 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm25788-201ENSMUST00000082721 131 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm22572-201ENSMUST00000082985 105 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm26263-201ENSMUST00000083281 164 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm25518-201ENSMUST00000083864 107 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
RTRAFQ9CQE8 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm12646-201ENSMUST00000119144 238 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm12412-201ENSMUST00000121867 328 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm14366-201ENSMUST00000121970 730 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm23184-201ENSMUST00000122594 131 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm24241-201ENSMUST00000157787 145 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm22668-201ENSMUST00000158716 260 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm20543-201ENSMUST00000174200 726 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Mir7241-201ENSMUST00000184532 64 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm43510-201ENSMUST00000197922 353 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm43587-201ENSMUST00000199590 204 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm22620-201ENSMUST00000082700 133 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm26328-201ENSMUST00000082821 107 ntBASIC1.48□□□□□ -2.17
RTRAFQ9CQE8 Gm25794-201ENSMUST00000083286 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms