Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm15167-201ENSMUST00000121997 187 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm3025-201ENSMUST00000163454 489 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm2878-201ENSMUST00000170173 486 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm25874-201ENSMUST00000178030 79 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm24638-201ENSMUST00000179807 132 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm29231-201ENSMUST00000179850 319 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm43652-201ENSMUST00000196219 675 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Gm2003-201ENSMUST00000118537 636 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm14852-201ENSMUST00000120065 647 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm24895-201ENSMUST00000122742 74 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm23956-201ENSMUST00000157211 119 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm23381-201ENSMUST00000157676 94 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm22556-201ENSMUST00000157803 100 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm7592-201ENSMUST00000160674 627 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm23042-201ENSMUST00000083866 101 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.51□□□□□ -2.17
Rpa3Q9CQ71 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm14931-201ENSMUST00000111079 253 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm12393-201ENSMUST00000117084 848 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm15714-201ENSMUST00000117168 250 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm25294-201ENSMUST00000122791 104 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm2020-201ENSMUST00000145242 579 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm23172-201ENSMUST00000157160 124 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm23230-201ENSMUST00000157298 133 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm23221-201ENSMUST00000158118 93 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm25831-201ENSMUST00000158924 163 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Mir3964-201ENSMUST00000174898 74 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Mir7241-201ENSMUST00000184532 64 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Mir3569-201ENSMUST00000185080 58 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm38154-201ENSMUST00000195444 340 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm42807-201ENSMUST00000200141 329 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm29809-201ENSMUST00000218423 493 ntBASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Rpa3Q9CQ71 Gm11854-201ENSMUST00000117839 446 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm24839-201ENSMUST00000122602 107 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm15878-201ENSMUST00000127561 306 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm25625-201ENSMUST00000157221 96 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm23718-201ENSMUST00000157350 307 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm24222-201ENSMUST00000158834 93 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm17113-201ENSMUST00000170118 171 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm25243-201ENSMUST00000174912 207 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm27878-201ENSMUST00000184000 106 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Mir19a-201ENSMUST00000083482 82 ntBASIC1.49□□□□□ -2.17
Rpa3Q9CQ71 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Gm14599-201ENSMUST00000120469 474 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Gm23122-201ENSMUST00000157645 103 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Gm22389-201ENSMUST00000158193 301 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Gm4076-201ENSMUST00000179230 965 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Mir6382-201ENSMUST00000184055 110 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Gm28466-201ENSMUST00000190678 659 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Gm38041-201ENSMUST00000194445 661 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Gm16976-205ENSMUST00000227324 226 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Rpa3Q9CQ71 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm25992-201ENSMUST00000102437 109 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm26147-201ENSMUST00000104479 114 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm14674-201ENSMUST00000117816 342 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm23713-201ENSMUST00000157353 70 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm22615-201ENSMUST00000158102 70 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm7953-201ENSMUST00000168278 469 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm43676-201ENSMUST00000197532 540 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms