Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Use1Q9CQ56 Mir687-201ENSMUST00000102166 89 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Mir873a-201ENSMUST00000104863 77 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm25317-201ENSMUST00000116824 129 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm13885-201ENSMUST00000117569 187 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm22143-201ENSMUST00000157401 203 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm23586-201ENSMUST00000157657 123 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm15914-201ENSMUST00000161922 309 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm28466-201ENSMUST00000190678 659 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm44395-201ENSMUST00000197056 153 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Use1Q9CQ56 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Use1Q9CQ56 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm25582-201ENSMUST00000083412 110 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm23503-201ENSMUST00000083903 107 ntBASIC1.74□□□□□ -2.13
Use1Q9CQ56 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Use1Q9CQ56 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm14835-201ENSMUST00000119039 315 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm25784-201ENSMUST00000122524 81 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm25454-201ENSMUST00000157947 315 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm24656-201ENSMUST00000177548 132 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm24306-201ENSMUST00000180229 79 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm37550-201ENSMUST00000193230 463 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Mir7021-201ENSMUST00000197026 63 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm42509-201ENSMUST00000197390 781 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm17991-201ENSMUST00000208139 297 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm19032-201ENSMUST00000208584 592 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm45252-201ENSMUST00000211579 397 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.73□□□□□ -2.13
Use1Q9CQ56 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Use1Q9CQ56 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm22508-201ENSMUST00000082772 110 ntBASIC1.73□□□□□ -2.13
Use1Q9CQ56 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Use1Q9CQ56 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Use1Q9CQ56 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Use1Q9CQ56 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm22674-201ENSMUST00000104413 131 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm22678-201ENSMUST00000116974 101 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm12636-201ENSMUST00000117395 624 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm12304-201ENSMUST00000120312 385 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm12926-201ENSMUST00000121158 409 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm24478-201ENSMUST00000157439 158 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm18356-201ENSMUST00000185677 623 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm37778-201ENSMUST00000191732 190 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Use1Q9CQ56 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.72□□□□□ -2.13
Use1Q9CQ56 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Gm24707-201ENSMUST00000082812 107 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Mir452-201ENSMUST00000093629 85 ntBASIC1.72□□□□□ -2.13
Use1Q9CQ56 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
Use1Q9CQ56 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm12393-201ENSMUST00000117084 848 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm14013-201ENSMUST00000119006 270 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm14887-201ENSMUST00000119522 663 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm22236-201ENSMUST00000157093 106 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm22843-201ENSMUST00000157710 134 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm25888-201ENSMUST00000157778 302 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm20543-201ENSMUST00000174200 726 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm24572-201ENSMUST00000175505 88 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Use1Q9CQ56 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Use1Q9CQ56 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Use1Q9CQ56 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.71□□□□□ -2.14
Use1Q9CQ56 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
Use1Q9CQ56 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm26077-201ENSMUST00000104064 123 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm23551-201ENSMUST00000116852 121 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm381-201ENSMUST00000117443 2037 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm14551-201ENSMUST00000120802 256 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm23429-201ENSMUST00000122486 149 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm24222-201ENSMUST00000158834 93 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Mir6399-201ENSMUST00000184050 84 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Mir6901-201ENSMUST00000185062 62 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Mir7678-201ENSMUST00000185076 71 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm10193-201ENSMUST00000188288 231 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm18775-201ENSMUST00000190763 586 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm43510-201ENSMUST00000197922 353 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.7□□□□□ -2.14
Use1Q9CQ56 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Gm7692-201ENSMUST00000213534 409 ntBASIC1.7□□□□□ -2.14
Use1Q9CQ56 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms