Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm12646-201ENSMUST00000119144 238 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Snord11-201ENSMUST00000158468 84 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm22500-201ENSMUST00000158982 99 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Mir496b-201ENSMUST00000184935 113 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm37081-201ENSMUST00000192034 196 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm6059-201ENSMUST00000196903 340 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Mir7217-201ENSMUST00000200304 62 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm29809-201ENSMUST00000218423 493 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Vps39Q8R5L3 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Mir127-201ENSMUST00000093568 70 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Mir452-201ENSMUST00000093629 85 ntBASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Vps39Q8R5L3 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Mir1195-201ENSMUST00000116818 98 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm22709-201ENSMUST00000116893 111 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm23752-201ENSMUST00000157584 115 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm25243-201ENSMUST00000174912 207 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm20656-201ENSMUST00000176925 518 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm27369-201ENSMUST00000185182 71 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm37869-201ENSMUST00000193385 595 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm42672-201ENSMUST00000197821 352 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.18□□□□□ -2.06
Vps39Q8R5L3 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm19032-201ENSMUST00000208584 592 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.18□□□□□ -2.06
Vps39Q8R5L3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm24274-201ENSMUST00000116787 124 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm24907-201ENSMUST00000116932 128 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm13804-201ENSMUST00000119552 172 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm11835-201ENSMUST00000120635 663 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm18296-201ENSMUST00000192475 783 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Trbv18-201ENSMUST00000194256 294 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm43245-201ENSMUST00000197603 468 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.17□□□□□ -2.06
Vps39Q8R5L3 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.17□□□□□ -2.06
Vps39Q8R5L3 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm23246-201ENSMUST00000083371 67 ntBASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Vps39Q8R5L3 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Mir687-201ENSMUST00000102166 89 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Mdga2-203ENSMUST00000113942 423 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm15215-201ENSMUST00000117773 489 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm15266-201ENSMUST00000119635 255 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm12770-201ENSMUST00000121734 462 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm23981-201ENSMUST00000157136 106 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm25711-201ENSMUST00000158633 128 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm15914-201ENSMUST00000161922 309 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm17072-201ENSMUST00000166673 658 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm22166-201ENSMUST00000178419 121 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm23288-201ENSMUST00000179213 121 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm29604-201ENSMUST00000187176 163 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm18775-201ENSMUST00000190763 586 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm19694-201ENSMUST00000192364 505 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm42925-201ENSMUST00000197359 285 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm3724-201ENSMUST00000197957 349 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm43865-201ENSMUST00000204721 127 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm45878-201ENSMUST00000211839 241 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Vps39Q8R5L3 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.16□□□□□ -2.06
Vps39Q8R5L3 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm25586-201ENSMUST00000082499 112 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm22229-201ENSMUST00000082987 108 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Mir300-201ENSMUST00000083485 79 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.16□□□□□ -2.06
Vps39Q8R5L3 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Vps39Q8R5L3 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.15□□□□□ -2.06
Vps39Q8R5L3 Gm381-201ENSMUST00000117443 2037 ntBASIC2.15□□□□□ -2.06
Vps39Q8R5L3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.15□□□□□ -2.06
Vps39Q8R5L3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Vps39Q8R5L3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Vps39Q8R5L3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Vps39Q8R5L3 Gm25507-201ENSMUST00000116981 144 ntBASIC2.15□□□□□ -2.07
Vps39Q8R5L3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.15□□□□□ -2.07
Vps39Q8R5L3 Gm12721-201ENSMUST00000120621 268 ntBASIC2.15□□□□□ -2.07
Vps39Q8R5L3 Gm27396-201ENSMUST00000157708 58 ntBASIC2.15□□□□□ -2.07
Vps39Q8R5L3 Gm23196-201ENSMUST00000158806 107 ntBASIC2.15□□□□□ -2.07
Vps39Q8R5L3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms