Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm21893-201ENSMUST00000179119 397 ntBASIC3.36□□□□□ -1.87
Clrn1Q8K445 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.36□□□□□ -1.87
Clrn1Q8K445 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.36□□□□□ -1.87
Clrn1Q8K445 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.36□□□□□ -1.87
Clrn1Q8K445 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
Clrn1Q8K445 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Clrn1Q8K445 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm25420-201ENSMUST00000104216 127 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm13355-201ENSMUST00000117996 317 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm14838-201ENSMUST00000118913 248 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm6574-201ENSMUST00000120037 362 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm25105-201ENSMUST00000122477 130 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm25392-201ENSMUST00000157335 297 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm22118-201ENSMUST00000175593 171 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm24799-201ENSMUST00000178431 79 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm25235-201ENSMUST00000179933 107 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm37575-201ENSMUST00000195467 309 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm23370-202ENSMUST00000197008 129 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm25480-201ENSMUST00000083217 133 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Clrn1Q8K445 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Mir541-201ENSMUST00000102097 90 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm26075-201ENSMUST00000104062 121 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm14518-201ENSMUST00000117351 542 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm11874-201ENSMUST00000117437 130 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm14782-201ENSMUST00000120151 195 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm22145-201ENSMUST00000157396 148 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm23540-201ENSMUST00000157543 164 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm10075-201ENSMUST00000162030 545 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm6947-201ENSMUST00000186254 78 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm28453-203ENSMUST00000187041 189 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Clrn1Q8K445 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm4036-201ENSMUST00000220842 626 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm23453-201ENSMUST00000083326 106 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Mir208a-201ENSMUST00000083498 83 ntBASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Clrn1Q8K445 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Clrn1Q8K445 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
Clrn1Q8K445 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.34□□□□□ -1.88
Clrn1Q8K445 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Clrn1Q8K445 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Clrn1Q8K445 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Clrn1Q8K445 Mir1193-201ENSMUST00000116761 121 ntBASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gm13541-201ENSMUST00000119519 283 ntBASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gm25390-201ENSMUST00000157341 103 ntBASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gm16289-201ENSMUST00000162079 183 ntBASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gm6660-201ENSMUST00000179149 468 ntBASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gm27445-201ENSMUST00000184484 72 ntBASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gm44355-201ENSMUST00000200417 104 ntBASIC3.33□□□□□ -1.88
Clrn1Q8K445 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.33□□□□□ -1.88
Clrn1Q8K445 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Clrn1Q8K445 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Clrn1Q8K445 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Clrn1Q8K445 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Clrn1Q8K445 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Clrn1Q8K445 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm22784-201ENSMUST00000104088 132 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm25833-201ENSMUST00000104137 133 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm24867-201ENSMUST00000104161 107 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm24282-201ENSMUST00000104232 66 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm13504-201ENSMUST00000117490 316 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm12417-201ENSMUST00000119153 403 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm5762-201ENSMUST00000119204 258 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm12793-201ENSMUST00000119268 292 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm23640-201ENSMUST00000157860 104 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm25438-201ENSMUST00000158281 110 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm22501-201ENSMUST00000158981 127 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Mir6371-201ENSMUST00000184470 111 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm27421-201ENSMUST00000184729 167 ntBASIC3.32□□□□□ -1.88
Clrn1Q8K445 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms