Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm23713-201ENSMUST00000157353 70 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm22615-201ENSMUST00000158102 70 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm22534-201ENSMUST00000158173 104 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm24210-201ENSMUST00000158263 133 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm24418-201ENSMUST00000177597 79 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm24639-201ENSMUST00000178518 79 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm23076-201ENSMUST00000179082 79 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm25077-201ENSMUST00000179157 79 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm45522-201ENSMUST00000210784 166 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
Prpf39Q8K2Z2 Gm23803-201ENSMUST00000104610 132 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm15030-201ENSMUST00000119804 484 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm23980-201ENSMUST00000157135 158 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm23391-201ENSMUST00000157579 104 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm25866-201ENSMUST00000158245 112 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm21729-201ENSMUST00000180058 664 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm21853-201ENSMUST00000180071 664 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm29495-201ENSMUST00000189319 664 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm28927-201ENSMUST00000191528 272 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm33354-201ENSMUST00000195448 906 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm43529-201ENSMUST00000199178 412 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm42578-201ENSMUST00000199960 194 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm25628-201ENSMUST00000084002 105 ntBASIC2.49□□□□□ -2.01
Prpf39Q8K2Z2 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm22752-201ENSMUST00000102083 109 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm25168-201ENSMUST00000104189 132 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm15986-201ENSMUST00000122153 400 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm22199-201ENSMUST00000122660 126 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm23586-201ENSMUST00000157657 123 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm24498-201ENSMUST00000158445 102 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm26214-201ENSMUST00000158581 107 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.48□□□□□ -2.01
Prpf39Q8K2Z2 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm13903-201ENSMUST00000120945 193 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm12779-201ENSMUST00000121496 143 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm25325-201ENSMUST00000122559 86 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm17072-201ENSMUST00000166673 658 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm24816-201ENSMUST00000175311 151 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm26622-201ENSMUST00000180520 298 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm27539-201ENSMUST00000184971 224 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm28900-201ENSMUST00000185232 156 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm42925-201ENSMUST00000197359 285 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm44825-201ENSMUST00000207557 150 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm44598-201ENSMUST00000207566 150 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Mir10a-201ENSMUST00000083585 110 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm23040-201ENSMUST00000083869 163 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Prpf39Q8K2Z2 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Prpf39Q8K2Z2 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Prpf39Q8K2Z2 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Gm11522-201ENSMUST00000120533 176 ntBASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Gm13581-201ENSMUST00000120675 278 ntBASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Gm14551-201ENSMUST00000120802 256 ntBASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Mir1942-201ENSMUST00000157274 63 ntBASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Gm20689-201ENSMUST00000176033 279 ntBASIC2.46□□□□□ -2.02
Prpf39Q8K2Z2 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms