Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.2□□□□□ -1.9
CopaQ8CIE6 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.2□□□□□ -1.9
CopaQ8CIE6 Snord68-201ENSMUST00000082516 86 ntBASIC3.2□□□□□ -1.9
CopaQ8CIE6 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CopaQ8CIE6 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CopaQ8CIE6 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CopaQ8CIE6 Mir701-201ENSMUST00000102208 109 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm22779-201ENSMUST00000104085 107 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm13876-201ENSMUST00000118451 261 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm11798-201ENSMUST00000119150 421 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm22073-201ENSMUST00000122668 189 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm27926-201ENSMUST00000157180 66 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm27582-201ENSMUST00000184084 126 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm28740-201ENSMUST00000186142 215 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.19□□□□□ -1.9
CopaQ8CIE6 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm24623-201ENSMUST00000082616 194 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.19□□□□□ -1.9
CopaQ8CIE6 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CopaQ8CIE6 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm14296-202ENSMUST00000108931 750 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm13457-201ENSMUST00000117885 267 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm15844-201ENSMUST00000118016 576 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm12071-201ENSMUST00000121968 469 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm14389-201ENSMUST00000140453 241 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm16218-201ENSMUST00000155424 388 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm23586-201ENSMUST00000157657 123 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm24997-201ENSMUST00000157910 105 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm25486-201ENSMUST00000158726 63 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm25162-201ENSMUST00000158906 159 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm21978-201ENSMUST00000179696 377 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm25284-201ENSMUST00000180345 141 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Mir7k-201ENSMUST00000184115 110 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm28579-201ENSMUST00000186143 369 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm29553-201ENSMUST00000189692 279 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm1833-201ENSMUST00000191608 682 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm18341-201ENSMUST00000197538 622 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm23517-201ENSMUST00000082830 192 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm23378-201ENSMUST00000082942 107 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm23723-201ENSMUST00000082996 132 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm26066-201ENSMUST00000083385 109 ntBASIC3.18□□□□□ -1.9
CopaQ8CIE6 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CopaQ8CIE6 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CopaQ8CIE6 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
CopaQ8CIE6 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm13806-201ENSMUST00000117822 325 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm8338-201ENSMUST00000163928 363 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm24085-201ENSMUST00000175172 116 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Mir6402-201ENSMUST00000183406 80 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm43355-201ENSMUST00000196541 346 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm44964-201ENSMUST00000207011 273 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm22979-201ENSMUST00000082609 159 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.17□□□□□ -1.9
CopaQ8CIE6 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CopaQ8CIE6 Gm26423-201ENSMUST00000104277 128 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm15714-201ENSMUST00000117168 250 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm14971-201ENSMUST00000117980 663 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm26027-201ENSMUST00000122725 268 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.16□□□□□ -1.9
CopaQ8CIE6 Mir1942-201ENSMUST00000157274 63 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm25054-201ENSMUST00000157370 97 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm22532-201ENSMUST00000158822 140 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm27893-201ENSMUST00000184408 194 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm29658-201ENSMUST00000185404 230 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm44654-201ENSMUST00000208052 329 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm44811-201ENSMUST00000209120 228 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm45403-201ENSMUST00000209453 276 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm18000-201ENSMUST00000212153 800 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm23738-201ENSMUST00000082828 171 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Snord14d-201ENSMUST00000083424 86 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Mir181a-2-201ENSMUST00000083489 76 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm25937-201ENSMUST00000083912 107 ntBASIC3.16□□□□□ -1.9
CopaQ8CIE6 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms