Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.42□□□□□ -2.18
Ccdc28aQ8CEI3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.42□□□□□ -2.18
Ccdc28aQ8CEI3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm22779-201ENSMUST00000104085 107 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm23538-201ENSMUST00000157535 101 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm22082-201ENSMUST00000157587 161 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm22803-201ENSMUST00000158049 283 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm24551-201ENSMUST00000158645 92 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm23181-201ENSMUST00000158685 110 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm25836-201ENSMUST00000158918 123 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm28466-201ENSMUST00000190678 659 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm38044-201ENSMUST00000192964 487 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm38238-201ENSMUST00000194334 346 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm23645-201ENSMUST00000083228 108 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm24610-201ENSMUST00000083270 109 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm22974-201ENSMUST00000083301 103 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm23246-201ENSMUST00000083371 67 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm22723-201ENSMUST00000083820 129 ntBASIC1.41□□□□□ -2.18
Ccdc28aQ8CEI3 Gm24582-201ENSMUST00000103967 103 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm23950-201ENSMUST00000104026 129 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm22091-201ENSMUST00000116908 127 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Snord13-201ENSMUST00000157627 104 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm23034-201ENSMUST00000158001 147 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Mir3086-201ENSMUST00000175072 87 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm25958-201ENSMUST00000175114 71 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm25707-201ENSMUST00000175120 96 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm29550-201ENSMUST00000185543 285 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm29657-201ENSMUST00000189807 342 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm38213-201ENSMUST00000193203 173 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm37029-201ENSMUST00000195773 239 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm46994-201ENSMUST00000221523 219 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm5955-201ENSMUST00000222712 219 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm25131-201ENSMUST00000082653 151 ntBASIC1.4□□□□□ -2.19
Ccdc28aQ8CEI3 Gm13903-201ENSMUST00000120945 193 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm24333-201ENSMUST00000175101 84 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm25035-201ENSMUST00000175414 77 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm24137-201ENSMUST00000180055 79 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm22391-201ENSMUST00000180356 79 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm43652-201ENSMUST00000196219 675 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm9377-201ENSMUST00000207227 623 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm44961-201ENSMUST00000207450 196 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm23516-201ENSMUST00000093728 107 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.39□□□□□ -2.19
Ccdc28aQ8CEI3 Gm26002-201ENSMUST00000101915 107 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Mir466n-201ENSMUST00000104798 94 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm15211-201ENSMUST00000118932 528 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm11359-201ENSMUST00000120039 567 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm2020-201ENSMUST00000145242 579 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm24394-201ENSMUST00000158141 123 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm17154-201ENSMUST00000165748 431 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm25936-201ENSMUST00000179952 114 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm28666-201ENSMUST00000186649 274 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm29950-201ENSMUST00000195273 237 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm8747-201ENSMUST00000195392 751 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm43512-201ENSMUST00000198495 176 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Mir29c-201ENSMUST00000083614 88 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.38□□□□□ -2.19
Ccdc28aQ8CEI3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Ccdc28aQ8CEI3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Ccdc28aQ8CEI3 Gm22496-201ENSMUST00000104493 88 ntBASIC1.37□□□□□ -2.19
Ccdc28aQ8CEI3 Gm6587-201ENSMUST00000120219 613 ntBASIC1.37□□□□□ -2.19
Ccdc28aQ8CEI3 Gm16412-201ENSMUST00000121602 273 ntBASIC1.37□□□□□ -2.19
Ccdc28aQ8CEI3 Gm10177-202ENSMUST00000161698 207 ntBASIC1.37□□□□□ -2.19
Ccdc28aQ8CEI3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.37□□□□□ -2.19
Ccdc28aQ8CEI3 Gm25175-201ENSMUST00000178712 79 ntBASIC1.37□□□□□ -2.19
Ccdc28aQ8CEI3 Gm28688-201ENSMUST00000187301 268 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms