Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm24984-201ENSMUST00000104454 133 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm22818-201ENSMUST00000157446 104 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm24997-201ENSMUST00000157910 105 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm25454-201ENSMUST00000157947 315 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm25658-201ENSMUST00000158472 128 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm24770-201ENSMUST00000158505 92 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm24053-201ENSMUST00000158620 105 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm24168-201ENSMUST00000178825 107 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm29231-201ENSMUST00000179850 319 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Mir463-201ENSMUST00000093570 75 ntBASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc40Q8BI79 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Mir582-201ENSMUST00000103758 81 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm20656-201ENSMUST00000176925 518 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm22851-201ENSMUST00000178741 94 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm25074-201ENSMUST00000178782 94 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm37361-201ENSMUST00000194345 132 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm45658-201ENSMUST00000209197 580 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm18774-201ENSMUST00000218269 601 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm22620-201ENSMUST00000082700 133 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm26328-201ENSMUST00000082821 107 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm25794-201ENSMUST00000083286 107 ntBASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Ccdc40Q8BI79 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Mir1195-201ENSMUST00000116818 98 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Gm13885-201ENSMUST00000117569 187 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Gm15077-201ENSMUST00000122344 362 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Gm22817-201ENSMUST00000157448 356 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Gm21885-201ENSMUST00000178891 327 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Gm43587-201ENSMUST00000199590 204 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Gm26265-201ENSMUST00000083277 135 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Mir10a-201ENSMUST00000083585 110 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Mir29c-201ENSMUST00000083614 88 ntBASIC2.2□□□□□ -2.06
Ccdc40Q8BI79 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Gm26015-201ENSMUST00000104402 125 ntBASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Gm14013-201ENSMUST00000119006 270 ntBASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Gm7916-201ENSMUST00000120325 456 ntBASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Gm25109-201ENSMUST00000122474 114 ntBASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Gm22733-201ENSMUST00000158094 91 ntBASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.19□□□□□ -2.06
Ccdc40Q8BI79 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm23422-201ENSMUST00000102000 107 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm26384-201ENSMUST00000102183 110 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Mir28b-201ENSMUST00000175399 80 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm27588-201ENSMUST00000185096 263 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm43510-201ENSMUST00000197922 353 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ccdc40Q8BI79 Gm25376-201ENSMUST00000104340 133 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm22674-201ENSMUST00000104413 131 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm13728-201ENSMUST00000117471 400 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm26102-201ENSMUST00000157251 284 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm23829-201ENSMUST00000157392 270 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm24010-201ENSMUST00000157731 282 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm24237-201ENSMUST00000157790 132 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm19932-201ENSMUST00000177033 313 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Mir7081-201ENSMUST00000184490 75 ntBASIC2.17□□□□□ -2.06
Ccdc40Q8BI79 Gm18356-201ENSMUST00000185677 623 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms