Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Gm14774-201ENSMUST00000117857 536 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Gm23381-201ENSMUST00000157676 94 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Gm26271-201ENSMUST00000158349 104 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Gm24656-201ENSMUST00000177548 132 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Mir3068-202ENSMUST00000197755 79 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Snord43-201ENSMUST00000199549 108 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Gm44181-201ENSMUST00000203106 483 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Gm18160-201ENSMUST00000214279 827 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Gm24921-201ENSMUST00000083024 107 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Snora33-201ENSMUST00000093556 129 ntBASIC1.71□□□□□ -2.14
Clrn3Q8BHH8 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm25317-201ENSMUST00000116824 129 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm12636-201ENSMUST00000117395 624 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm11786-201ENSMUST00000120799 155 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm14530-201ENSMUST00000122391 333 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm25784-201ENSMUST00000122524 81 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm25325-201ENSMUST00000122559 86 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm23206-201ENSMUST00000122720 184 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm25051-201ENSMUST00000158602 249 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm24053-201ENSMUST00000158620 105 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm23548-201ENSMUST00000158963 106 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm2966-201ENSMUST00000166052 481 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm23568-201ENSMUST00000177960 92 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm22264-201ENSMUST00000178200 107 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm24829-201ENSMUST00000179245 92 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm27722-201ENSMUST00000183908 76 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm42509-201ENSMUST00000197390 781 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm23454-201ENSMUST00000083332 133 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Gm22578-201ENSMUST00000083730 107 ntBASIC1.7□□□□□ -2.14
Clrn3Q8BHH8 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm23202-201ENSMUST00000104376 129 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Mir669d-201ENSMUST00000104644 121 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Mdga2-203ENSMUST00000113942 423 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm14215-201ENSMUST00000120578 221 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm27396-201ENSMUST00000157708 58 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm22666-201ENSMUST00000158717 164 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm16584-201ENSMUST00000159267 189 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm7592-201ENSMUST00000160674 627 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm2930-201ENSMUST00000170403 474 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm21978-201ENSMUST00000179696 377 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm27588-201ENSMUST00000185096 263 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm42925-201ENSMUST00000197359 285 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm45365-201ENSMUST00000209489 256 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm45382-201ENSMUST00000210607 151 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm29809-201ENSMUST00000218423 493 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Clrn3Q8BHH8 Mir873a-201ENSMUST00000104863 77 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm12926-201ENSMUST00000121158 409 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm22143-201ENSMUST00000157401 203 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm23586-201ENSMUST00000157657 123 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm17085-201ENSMUST00000165425 502 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm24572-201ENSMUST00000175505 88 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Mir7226-201ENSMUST00000184953 60 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm28438-201ENSMUST00000188299 345 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm42164-201ENSMUST00000198881 379 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm42807-201ENSMUST00000200141 329 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm45232-201ENSMUST00000207811 162 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Clrn3Q8BHH8 Gm26265-201ENSMUST00000083277 135 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms