Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm26457-201ENSMUST00000082678 78 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm22620-201ENSMUST00000082700 133 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm25202-201ENSMUST00000082838 191 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm23412-201ENSMUST00000083017 107 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Defa-ps13-201ENSMUST00000120695 204 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm14761-201ENSMUST00000121363 262 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm23867-201ENSMUST00000122649 274 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm23120-201ENSMUST00000157654 287 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm25384-201ENSMUST00000157807 105 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Mir6346-201ENSMUST00000183982 81 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Mir8096-201ENSMUST00000184526 127 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Mir6914-201ENSMUST00000184999 69 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm37889-201ENSMUST00000194174 251 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm30341-201ENSMUST00000194363 289 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm9377-201ENSMUST00000207227 623 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm45678-201ENSMUST00000210509 295 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Gm9370-201ENSMUST00000222787 609 ntBASIC3.09□□□□□ -1.91
Ubfd1Q78JW9 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ubfd1Q78JW9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Ubfd1Q78JW9 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.09□□□□□ -1.92
Ubfd1Q78JW9 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm22939-201ENSMUST00000103958 131 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm14389-201ENSMUST00000140453 241 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm22187-201ENSMUST00000157819 129 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm5967-201ENSMUST00000172723 494 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm24084-201ENSMUST00000175173 137 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm25121-201ENSMUST00000179846 79 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm27648-201ENSMUST00000184315 107 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm27249-201ENSMUST00000185049 328 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm29490-201ENSMUST00000190923 342 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm43739-201ENSMUST00000198294 307 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm43746-201ENSMUST00000200028 317 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Mir496a-201ENSMUST00000093627 79 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ubfd1Q78JW9 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm22654-201ENSMUST00000157874 105 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm17522-201ENSMUST00000178144 498 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm5329-201ENSMUST00000186898 463 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm18433-202ENSMUST00000195682 196 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm43355-201ENSMUST00000196541 346 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm19563-201ENSMUST00000222031 270 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm26327-201ENSMUST00000093724 111 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Ubfd1Q78JW9 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ubfd1Q78JW9 Mir291a-201ENSMUST00000104815 82 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms