Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm24503-201ENSMUST00000158454 135 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm22890-201ENSMUST00000158642 144 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm25362-201ENSMUST00000158854 105 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm23355-201ENSMUST00000177614 107 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm25450-201ENSMUST00000179144 107 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm10067-201ENSMUST00000179462 348 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm23148-201ENSMUST00000180367 107 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm27582-201ENSMUST00000184084 126 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Mir6345-201ENSMUST00000184286 128 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm28257-201ENSMUST00000185244 463 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm44650-201ENSMUST00000206929 194 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm7065-201ENSMUST00000222150 474 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm25258-201ENSMUST00000083049 107 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm23481-201ENSMUST00000104173 131 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm15282-201ENSMUST00000117707 300 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm9850-201ENSMUST00000117916 227 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm24629-201ENSMUST00000122762 89 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm26148-201ENSMUST00000157430 68 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm27396-201ENSMUST00000157708 58 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm25438-201ENSMUST00000158281 110 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm23474-201ENSMUST00000158884 75 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm27611-201ENSMUST00000184690 108 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Mir6943-201ENSMUST00000185186 66 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm44099-201ENSMUST00000203299 112 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm43978-201ENSMUST00000203491 451 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Gm10222-201ENSMUST00000088336 294 ntBASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rnf220Q6PDX6 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm22658-201ENSMUST00000104196 155 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm22657-201ENSMUST00000104197 132 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm12954-201ENSMUST00000118610 611 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm15466-201ENSMUST00000122299 333 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm25386-201ENSMUST00000157814 288 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm4468-201ENSMUST00000170206 294 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm24799-201ENSMUST00000178431 79 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm4479-201ENSMUST00000178807 171 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Mir6355-201ENSMUST00000183687 106 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm18486-201ENSMUST00000184040 298 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm28629-201ENSMUST00000187309 263 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm28848-201ENSMUST00000189984 168 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.29□□□□□ -1.88
Rnf220Q6PDX6 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm14894-201ENSMUST00000117170 270 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm13567-201ENSMUST00000118026 247 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm11572-201ENSMUST00000119164 120 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm13210-201ENSMUST00000121483 273 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm15065-201ENSMUST00000121699 273 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm27723-201ENSMUST00000157398 63 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm22726-201ENSMUST00000158089 179 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm25436-201ENSMUST00000158275 145 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm25605-201ENSMUST00000158364 124 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm22527-201ENSMUST00000158816 106 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm23476-201ENSMUST00000158881 274 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm17117-201ENSMUST00000163665 299 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Mir1251-201ENSMUST00000175486 84 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm24308-201ENSMUST00000177773 114 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm27698-201ENSMUST00000184060 249 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm37449-201ENSMUST00000193016 270 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm18658-201ENSMUST00000195558 270 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm42832-201ENSMUST00000196361 745 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 AC163033.1-201ENSMUST00000218608 157 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Gm23247-201ENSMUST00000083373 107 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.28□□□□□ -1.88
Rnf220Q6PDX6 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Rnf220Q6PDX6 Gm23202-201ENSMUST00000104376 129 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms