Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.1□□□□□ -2.07
Ccdc36Q6PDM4 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.1□□□□□ -2.07
Ccdc36Q6PDM4 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm26396-201ENSMUST00000104093 132 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm24889-201ENSMUST00000104388 132 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm14868-201ENSMUST00000117840 216 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm13475-201ENSMUST00000119290 234 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm15029-201ENSMUST00000119742 199 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm14629-201ENSMUST00000122428 144 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm23016-201ENSMUST00000158431 62 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm24810-201ENSMUST00000175317 70 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm20794-201ENSMUST00000177626 628 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm25528-201ENSMUST00000180264 132 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Mir7081-201ENSMUST00000184490 75 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm27490-201ENSMUST00000184754 128 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm37568-201ENSMUST00000191755 364 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm44909-201ENSMUST00000208756 165 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm2436-201ENSMUST00000219562 774 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm24043-201ENSMUST00000083108 116 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm23727-201ENSMUST00000083352 164 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Gm3867-201ENSMUST00000086108 279 ntBASIC2.09□□□□□ -2.07
Ccdc36Q6PDM4 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.09□□□□□ -2.08
Ccdc36Q6PDM4 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Ccdc36Q6PDM4 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.09□□□□□ -2.08
Ccdc36Q6PDM4 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.09□□□□□ -2.08
Ccdc36Q6PDM4 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm22032-201ENSMUST00000116946 116 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm11785-201ENSMUST00000120165 601 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm15379-201ENSMUST00000121224 648 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm11254-201ENSMUST00000122368 653 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm26256-201ENSMUST00000122499 186 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm24419-201ENSMUST00000157875 332 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm24518-201ENSMUST00000180275 94 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm7692-201ENSMUST00000213534 409 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm20102-201ENSMUST00000222445 220 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm22154-201ENSMUST00000083844 131 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ccdc36Q6PDM4 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm22834-201ENSMUST00000102021 79 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm14307-201ENSMUST00000118930 291 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm14297-201ENSMUST00000129110 291 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm26041-201ENSMUST00000158148 108 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm22538-201ENSMUST00000158169 299 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm23024-201ENSMUST00000158770 292 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm37081-201ENSMUST00000192034 196 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm18971-201ENSMUST00000197240 374 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm32222-201ENSMUST00000203296 298 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm45387-201ENSMUST00000209792 632 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm45452-201ENSMUST00000210905 177 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm18854-201ENSMUST00000211196 329 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm8031-201ENSMUST00000213430 626 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm7240-201ENSMUST00000220769 664 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm46389-201ENSMUST00000223199 392 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm23627-201ENSMUST00000082459 107 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm22502-201ENSMUST00000082488 107 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm22977-201ENSMUST00000082615 107 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm24149-201ENSMUST00000082757 107 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm26056-201ENSMUST00000083043 104 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm25579-201ENSMUST00000083407 106 ntBASIC2.07□□□□□ -2.08
Ccdc36Q6PDM4 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm11849-201ENSMUST00000121293 261 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm14821-201ENSMUST00000121975 435 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm22452-201ENSMUST00000122804 104 ntBASIC2.06□□□□□ -2.08
Ccdc36Q6PDM4 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms