Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm28848-201ENSMUST00000189984 168 ntBASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 Gm23443-201ENSMUST00000082916 128 ntBASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Cpsf6Q6NVF9 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm23481-201ENSMUST00000104173 131 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm24855-201ENSMUST00000104848 97 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Mir1193-201ENSMUST00000116761 121 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm8244-201ENSMUST00000121254 264 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm6762-201ENSMUST00000121769 289 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm23585-201ENSMUST00000157656 102 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm25386-201ENSMUST00000157814 288 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm26403-201ENSMUST00000158500 105 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Mir6986-201ENSMUST00000184483 58 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm38238-201ENSMUST00000194334 346 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm38088-201ENSMUST00000195829 241 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm43563-201ENSMUST00000196761 198 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm18441-201ENSMUST00000223539 617 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Cpsf6Q6NVF9 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Mir551b-201ENSMUST00000102165 98 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm26476-201ENSMUST00000122618 313 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm23231-201ENSMUST00000157299 104 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm23331-201ENSMUST00000157423 108 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm24850-201ENSMUST00000158029 119 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm22212-201ENSMUST00000158096 106 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm23260-201ENSMUST00000158317 172 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Mir6414-201ENSMUST00000183685 82 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm27952-201ENSMUST00000184748 105 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm17966-201ENSMUST00000193453 594 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm42814-201ENSMUST00000199370 460 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm44052-201ENSMUST00000203382 396 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm44182-201ENSMUST00000204052 115 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm22620-201ENSMUST00000082700 133 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm25481-201ENSMUST00000083221 158 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm23453-201ENSMUST00000083326 106 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cpsf6Q6NVF9 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.71□□□□□ -1.81
Cpsf6Q6NVF9 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.71□□□□□ -1.81
Cpsf6Q6NVF9 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.71□□□□□ -1.81
Cpsf6Q6NVF9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Gm15714-201ENSMUST00000117168 250 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Gm13432-201ENSMUST00000118861 241 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Gm16327-201ENSMUST00000137146 228 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Gm6625-201ENSMUST00000177870 272 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Gm42988-201ENSMUST00000198116 225 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cpsf6Q6NVF9 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Cpsf6Q6NVF9 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms