Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.44□□□□□ -2.18
Tpm4Q6IRU2 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Tpm4Q6IRU2 Gm26166-201ENSMUST00000083788 107 ntBASIC1.44□□□□□ -2.18
Tpm4Q6IRU2 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm23010-201ENSMUST00000104151 126 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm26049-201ENSMUST00000157313 108 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm22559-201ENSMUST00000157329 134 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm24333-201ENSMUST00000175101 84 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm6660-201ENSMUST00000179149 468 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm27878-201ENSMUST00000184000 106 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Mir7026-201ENSMUST00000184384 67 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm27942-201ENSMUST00000184669 101 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm8747-201ENSMUST00000195392 751 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm43026-201ENSMUST00000202972 325 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm44128-201ENSMUST00000204909 219 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm45730-201ENSMUST00000212560 395 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Mir29c-201ENSMUST00000083614 88 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.43□□□□□ -2.18
Tpm4Q6IRU2 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm23956-201ENSMUST00000157211 119 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm23387-201ENSMUST00000158586 107 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm24754-201ENSMUST00000177997 107 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm23648-201ENSMUST00000180301 107 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm42807-201ENSMUST00000200141 329 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm22005-201ENSMUST00000082795 141 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm23506-201ENSMUST00000083077 107 ntBASIC1.42□□□□□ -2.18
Tpm4Q6IRU2 Gm26147-201ENSMUST00000104479 114 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm22713-201ENSMUST00000116895 130 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm14879-201ENSMUST00000117308 507 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm15211-201ENSMUST00000118932 528 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm14428-201ENSMUST00000120408 822 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm22389-201ENSMUST00000158193 301 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm25730-201ENSMUST00000178753 165 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm38044-201ENSMUST00000192964 487 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm43723-201ENSMUST00000196886 189 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm44483-201ENSMUST00000197203 97 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm45101-201ENSMUST00000208327 232 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm44554-201ENSMUST00000208738 147 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm18488-201ENSMUST00000215082 364 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm25257-201ENSMUST00000083907 110 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Olfr575-201ENSMUST00000084812 957 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Gm5670-201ENSMUST00000093546 372 ntBASIC1.41□□□□□ -2.18
Tpm4Q6IRU2 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.4□□□□□ -2.18
Tpm4Q6IRU2 Gm11845-201ENSMUST00000117886 327 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm11857-201ENSMUST00000119817 324 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm6587-201ENSMUST00000120219 613 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm15177-201ENSMUST00000120491 577 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm22765-201ENSMUST00000158371 128 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm25831-201ENSMUST00000158924 163 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm25853-201ENSMUST00000082793 132 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm23741-201ENSMUST00000097237 171 ntBASIC1.4□□□□□ -2.19
Tpm4Q6IRU2 Gm13378-201ENSMUST00000117483 336 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm12016-201ENSMUST00000119079 681 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm14852-201ENSMUST00000120065 647 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Mir1942-201ENSMUST00000157274 63 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm23713-201ENSMUST00000157353 70 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm23381-201ENSMUST00000157676 94 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm22615-201ENSMUST00000158102 70 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm29600-201ENSMUST00000188687 377 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm38149-201ENSMUST00000191943 339 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm44137-201ENSMUST00000203670 367 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Gm23454-201ENSMUST00000083332 133 ntBASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Tpm4Q6IRU2 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Tpm4Q6IRU2 Gm24582-201ENSMUST00000103967 103 ntBASIC1.38□□□□□ -2.19
Tpm4Q6IRU2 Gm6664-201ENSMUST00000119138 468 ntBASIC1.38□□□□□ -2.19
Tpm4Q6IRU2 Gm13903-201ENSMUST00000120945 193 ntBASIC1.38□□□□□ -2.19
Tpm4Q6IRU2 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms