Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm43708-201ENSMUST00000198857 961 ntBASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm45288-201ENSMUST00000210236 151 ntBASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm21089-201ENSMUST00000215843 325 ntBASIC0.29□□□□□ -2.36
Col7a1Q63870 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm23124-201ENSMUST00000157650 107 ntBASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Col7a1Q63870 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm25624-201ENSMUST00000157222 275 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm24963-201ENSMUST00000157916 144 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm29231-201ENSMUST00000179850 319 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm27610-201ENSMUST00000184026 74 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm27160-201ENSMUST00000184837 199 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm18356-201ENSMUST00000185677 623 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm5731-201ENSMUST00000190969 481 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Snord43-201ENSMUST00000199549 108 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 AC165437.1-201ENSMUST00000228640 536 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm24152-201ENSMUST00000082764 163 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm23983-201ENSMUST00000157142 114 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm25936-201ENSMUST00000179952 114 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Mir6393-201ENSMUST00000183709 94 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm44482-201ENSMUST00000199232 103 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm44384-201ENSMUST00000200208 114 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC0.28□□□□□ -2.36
Col7a1Q63870 AC115357.1-201ENSMUST00000227575 466 ntBASIC0.28□□□□□ -2.36
Col7a1Q63870 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC0.28□□□□□ -2.36
Col7a1Q63870 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col7a1Q63870 Gm12639-201ENSMUST00000121400 493 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm23429-201ENSMUST00000122486 149 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm23713-201ENSMUST00000157353 70 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm22615-201ENSMUST00000158102 70 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm25162-201ENSMUST00000158906 159 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm17119-201ENSMUST00000163943 280 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Snord87-201ENSMUST00000175437 87 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm38274-201ENSMUST00000195689 148 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm43199-201ENSMUST00000200019 307 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm26439-201ENSMUST00000082592 106 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm14674-201ENSMUST00000117816 342 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm11813-201ENSMUST00000118586 291 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm6664-201ENSMUST00000119138 468 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm14651-201ENSMUST00000147192 442 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm17085-201ENSMUST00000165425 502 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm22995-201ENSMUST00000179670 107 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm7654-201ENSMUST00000186738 683 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm45386-201ENSMUST00000210194 218 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm24535-201ENSMUST00000083140 107 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Mir214-201ENSMUST00000083582 110 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Mir93-201ENSMUST00000083593 88 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm23520-201ENSMUST00000093736 107 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Col7a1Q63870 AA413626-201ENSMUST00000121125 494 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm9001-201ENSMUST00000121642 399 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm26101-201ENSMUST00000157246 105 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm37029-201ENSMUST00000195773 239 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 Gm45658-201ENSMUST00000209197 580 ntBASIC0.27□□□□□ -2.37
Col7a1Q63870 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Col7a1Q63870 Mir487b-201ENSMUST00000102265 82 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm24915-201ENSMUST00000157288 78 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm16162-201ENSMUST00000162296 297 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm24197-201ENSMUST00000175085 109 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm17987-201ENSMUST00000206902 603 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 AC153506.2-201ENSMUST00000218051 257 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm4921-201ENSMUST00000219804 992 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm10264-201ENSMUST00000220589 429 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 AC154851.2-201ENSMUST00000222172 644 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 AC161758.2-201ENSMUST00000228513 218 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm26328-201ENSMUST00000082821 107 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Mir107-201ENSMUST00000083660 87 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm11843-201ENSMUST00000118984 425 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC0.26□□□□□ -2.37
Col7a1Q63870 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.26□□□□□ -2.37
Col7a1Q63870 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm27640-201ENSMUST00000184580 147 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 Gm18113-201ENSMUST00000220630 303 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 AC134254.4-201ENSMUST00000223086 370 ntBASIC0.26□□□□□ -2.37
Col7a1Q63870 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.25□□□□□ -2.37
Col7a1Q63870 Gm14364-201ENSMUST00000129209 267 ntBASIC0.25□□□□□ -2.37
Col7a1Q63870 Gm25621-201ENSMUST00000157223 114 ntBASIC0.25□□□□□ -2.37
Col7a1Q63870 Gm22944-201ENSMUST00000158662 133 ntBASIC0.25□□□□□ -2.37
Col7a1Q63870 Gm28344-201ENSMUST00000185704 279 ntBASIC0.25□□□□□ -2.37
Col7a1Q63870 Gm29647-201ENSMUST00000188795 666 ntBASIC0.25□□□□□ -2.37
Col7a1Q63870 Gm28504-201ENSMUST00000190977 666 ntBASIC0.25□□□□□ -2.37
Col7a1Q63870 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Col7a1Q63870 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Col7a1Q63870 Gm26224-201ENSMUST00000082506 80 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms