Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.57□□□□□ -2
Six2Q62232 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.57□□□□□ -2
Six2Q62232 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.57□□□□□ -2
Six2Q62232 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Six2Q62232 Gm22247-201ENSMUST00000082476 131 ntBASIC2.57□□□□□ -2
Six2Q62232 Gm25475-201ENSMUST00000082825 180 ntBASIC2.57□□□□□ -2
Six2Q62232 Mir10a-201ENSMUST00000083585 110 ntBASIC2.57□□□□□ -2
Six2Q62232 Gm25257-201ENSMUST00000083907 110 ntBASIC2.57□□□□□ -2
Six2Q62232 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Six2Q62232 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.56□□□□□ -2
Six2Q62232 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Six2Q62232 Gm13756-201ENSMUST00000117618 222 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm14841-201ENSMUST00000121067 758 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm23956-201ENSMUST00000157211 119 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm23752-201ENSMUST00000157584 115 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm24691-201ENSMUST00000157762 140 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm24959-201ENSMUST00000157924 146 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm20462-201ENSMUST00000172623 408 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.56□□□□□ -2
Six2Q62232 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm37313-201ENSMUST00000191673 290 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm8242-202ENSMUST00000193056 475 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm37428-201ENSMUST00000193886 137 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm37616-201ENSMUST00000193974 322 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.56□□□□□ -2
Six2Q62232 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.56□□□□□ -2
Six2Q62232 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm6012-201ENSMUST00000210821 730 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm5023-201ENSMUST00000217442 587 ntBASIC2.56□□□□□ -2
Six2Q62232 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.56□□□□□ -2
Six2Q62232 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.56□□□□□ -2
Six2Q62232 Gm22622-201ENSMUST00000082870 129 ntBASIC2.56□□□□□ -2
Six2Q62232 Mir193a-201ENSMUST00000083461 66 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.56□□□□□ -2
Six2Q62232 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Six2Q62232 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Six2Q62232 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Six2Q62232 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.56□□□□□ -2
Six2Q62232 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.56□□□□□ -2
Six2Q62232 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.56□□□□□ -2
Six2Q62232 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Six2Q62232 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Six2Q62232 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Six2Q62232 Gm23175-201ENSMUST00000104371 132 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm23803-201ENSMUST00000104610 132 ntBASIC2.55□□□□□ -2
Six2Q62232 Snord98-201ENSMUST00000116819 65 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm9009-201ENSMUST00000117321 326 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm15379-201ENSMUST00000121224 648 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm14972-201ENSMUST00000121780 364 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm25270-201ENSMUST00000122606 138 ntBASIC2.55□□□□□ -2
Six2Q62232 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.55□□□□□ -2
Six2Q62232 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm24086-201ENSMUST00000175171 98 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm23793-201ENSMUST00000179396 117 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm27532-201ENSMUST00000183726 113 ntBASIC2.55□□□□□ -2
Six2Q62232 Mir6916-201ENSMUST00000184514 63 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm28700-201ENSMUST00000187614 579 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm37128-201ENSMUST00000192599 232 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm43722-201ENSMUST00000196054 124 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm42925-201ENSMUST00000197359 285 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm43284-201ENSMUST00000200103 253 ntBASIC2.55□□□□□ -2
Six2Q62232 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.55□□□□□ -2
Six2Q62232 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.55□□□□□ -2
Six2Q62232 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Six2Q62232 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.55□□□□□ -2
Six2Q62232 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Six2Q62232 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.55□□□□□ -2
Six2Q62232 Gm4945-201ENSMUST00000075152 453 ntBASIC2.55□□□□□ -2
Six2Q62232 Snord42a-201ENSMUST00000082606 65 ntBASIC2.55□□□□□ -2
Six2Q62232 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.55□□□□□ -2
Six2Q62232 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.55□□□□□ -2
Six2Q62232 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six2Q62232 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.55□□□□□ -2
Six2Q62232 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.54□□□□□ -2
Six2Q62232 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Six2Q62232 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm14652-201ENSMUST00000118479 235 ntBASIC2.54□□□□□ -2
Six2Q62232 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm14269-201ENSMUST00000120455 306 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.54□□□□□ -2
Six2Q62232 Gm26275-201ENSMUST00000157101 268 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm26149-201ENSMUST00000157432 108 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm22085-201ENSMUST00000158344 110 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm26402-201ENSMUST00000158499 113 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm23704-201ENSMUST00000158844 340 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm16038-201ENSMUST00000159317 193 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm16289-201ENSMUST00000162079 183 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm3027-201ENSMUST00000167579 451 ntBASIC2.54□□□□□ -2
Six2Q62232 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Six2Q62232 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms