Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm28257-201ENSMUST00000185244 463 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm28951-201ENSMUST00000190742 313 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm7871-201ENSMUST00000195346 618 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm44083-201ENSMUST00000203114 337 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm44223-201ENSMUST00000204854 114 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm23738-201ENSMUST00000082828 171 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Mir208a-201ENSMUST00000083498 83 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm25410-201ENSMUST00000083758 137 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CtcfQ61164 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CtcfQ61164 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CtcfQ61164 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm381-201ENSMUST00000117443 2037 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CtcfQ61164 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CtcfQ61164 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CtcfQ61164 Gm13343-201ENSMUST00000116474 105 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm13329-201ENSMUST00000117063 265 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm13518-201ENSMUST00000120018 233 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm26027-201ENSMUST00000122725 268 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm22037-201ENSMUST00000157280 296 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm22651-201ENSMUST00000157872 94 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CtcfQ61164 Gm17166-201ENSMUST00000172006 431 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm23047-201ENSMUST00000177661 94 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm26426-201ENSMUST00000177866 123 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm26060-201ENSMUST00000180094 123 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm29350-201ENSMUST00000189141 541 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm44324-201ENSMUST00000198517 135 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CtcfQ61164 Gm24045-201ENSMUST00000083113 98 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm22577-201ENSMUST00000083731 109 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.16□□□□□ -1.9
CtcfQ61164 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.15□□□□□ -1.9
CtcfQ61164 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm16171-201ENSMUST00000118004 324 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm12191-201ENSMUST00000118307 348 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm13510-201ENSMUST00000118659 429 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm9703-201ENSMUST00000119573 343 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm22187-201ENSMUST00000157819 129 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm20672-201ENSMUST00000176605 261 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CtcfQ61164 Mir5123-201ENSMUST00000177794 83 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CtcfQ61164 Gm26622-201ENSMUST00000180520 298 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Mir6402-201ENSMUST00000183406 80 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm27582-201ENSMUST00000184084 126 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm28282-201ENSMUST00000186072 186 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm44336-201ENSMUST00000203696 468 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.15□□□□□ -1.91
CtcfQ61164 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm23406-201ENSMUST00000082537 122 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Gm10343-201ENSMUST00000096279 348 ntBASIC3.15□□□□□ -1.91
CtcfQ61164 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CtcfQ61164 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CtcfQ61164 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CtcfQ61164 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CtcfQ61164 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Mir1195-201ENSMUST00000116818 98 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Gm8260-201ENSMUST00000119230 353 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.14□□□□□ -1.91
CtcfQ61164 Gm6956-201ENSMUST00000134724 546 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.14□□□□□ -1.91
CtcfQ61164 Gm23895-201ENSMUST00000158108 160 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Gm23141-201ENSMUST00000178682 94 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.14□□□□□ -1.91
CtcfQ61164 Gm19202-201ENSMUST00000198096 808 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Gm44256-201ENSMUST00000203304 335 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.14□□□□□ -1.91
CtcfQ61164 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CtcfQ61164 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CtcfQ61164 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CtcfQ61164 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.14□□□□□ -1.91
CtcfQ61164 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CtcfQ61164 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms