Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Snord42a-201ENSMUST00000082606 65 ntBASIC2.89□□□□□ -1.95
ClpbQ60649 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ClpbQ60649 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ClpbQ60649 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
ClpbQ60649 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ClpbQ60649 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
ClpbQ60649 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
ClpbQ60649 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
ClpbQ60649 Gm14307-201ENSMUST00000118930 291 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm8260-201ENSMUST00000119230 353 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm25781-201ENSMUST00000122527 84 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm25325-201ENSMUST00000122559 86 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm14297-201ENSMUST00000129110 291 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.88□□□□□ -1.95
ClpbQ60649 Gm27510-201ENSMUST00000158214 64 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm22085-201ENSMUST00000158344 110 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ClpbQ60649 Gm27796-201ENSMUST00000183863 261 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Mir7k-201ENSMUST00000184115 110 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm19777-201ENSMUST00000191940 358 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm43355-201ENSMUST00000196541 346 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Gm9370-201ENSMUST00000222787 609 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ClpbQ60649 Snord14d-201ENSMUST00000083424 86 ntBASIC2.88□□□□□ -1.95
ClpbQ60649 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ClpbQ60649 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
ClpbQ60649 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ClpbQ60649 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
ClpbQ60649 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ClpbQ60649 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ClpbQ60649 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.87□□□□□ -1.95
ClpbQ60649 Gm23747-201ENSMUST00000104228 131 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm13504-201ENSMUST00000117490 316 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm15896-201ENSMUST00000118045 440 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm13409-201ENSMUST00000122072 546 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm22026-201ENSMUST00000122735 281 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.87□□□□□ -1.95
ClpbQ60649 Gm20651-201ENSMUST00000177219 329 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm26928-201ENSMUST00000182674 572 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm28016-201ENSMUST00000184594 196 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm28838-201ENSMUST00000186338 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm20058-201ENSMUST00000186939 284 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm29635-201ENSMUST00000187221 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm28629-201ENSMUST00000187309 263 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm29026-201ENSMUST00000187787 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm28797-201ENSMUST00000188543 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm28855-201ENSMUST00000188680 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm28705-201ENSMUST00000189548 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm28939-201ENSMUST00000190351 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm28223-201ENSMUST00000190469 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.87□□□□□ -1.95
ClpbQ60649 Gm29092-201ENSMUST00000190768 315 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.87□□□□□ -1.95
ClpbQ60649 Gm37361-201ENSMUST00000194345 132 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm30341-201ENSMUST00000194363 289 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm45403-201ENSMUST00000209453 276 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm45375-201ENSMUST00000210338 280 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ClpbQ60649 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.87□□□□□ -1.95
ClpbQ60649 Gm25929-201ENSMUST00000082784 107 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm26066-201ENSMUST00000083385 109 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm26111-201ENSMUST00000083969 106 ntBASIC2.87□□□□□ -1.95
ClpbQ60649 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
ClpbQ60649 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm9009-201ENSMUST00000117321 326 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm12723-201ENSMUST00000120700 451 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm26255-201ENSMUST00000122492 103 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm22073-201ENSMUST00000122668 189 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm23586-201ENSMUST00000157657 123 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm24504-201ENSMUST00000157679 100 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm23641-201ENSMUST00000157857 101 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm26088-201ENSMUST00000157896 131 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm22435-201ENSMUST00000158552 128 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm24056-201ENSMUST00000158617 146 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm24085-201ENSMUST00000175172 116 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ClpbQ60649 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ClpbQ60649 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ClpbQ60649 Gm17522-201ENSMUST00000178144 498 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ClpbQ60649 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ClpbQ60649 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ClpbQ60649 Gm27698-201ENSMUST00000184060 249 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.86□□□□□ -1.95
ClpbQ60649 Gm44524-201ENSMUST00000203899 271 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 Gm45315-201ENSMUST00000209283 333 ntBASIC2.86□□□□□ -1.95
ClpbQ60649 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms