Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm13087-201ENSMUST00000118298 256 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm15536-201ENSMUST00000121411 114 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm12591-201ENSMUST00000122407 1177 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 n-R5s159-201ENSMUST00000122681 120 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm24100-201ENSMUST00000178592 79 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm26189-201ENSMUST00000179879 107 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm37104-201ENSMUST00000193278 196 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Mir3068-202ENSMUST00000197755 79 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm44324-201ENSMUST00000198517 135 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm43232-201ENSMUST00000201346 364 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm18691-201ENSMUST00000203593 872 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm44666-201ENSMUST00000208544 391 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 AC138401.1-201ENSMUST00000221533 116 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm23628-201ENSMUST00000082464 173 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Mir22-201ENSMUST00000083595 95 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Olfr575-201ENSMUST00000084812 957 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm23109-201ENSMUST00000116867 126 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm14915-201ENSMUST00000120747 204 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm15878-201ENSMUST00000127561 306 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm24858-201ENSMUST00000158058 323 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm25012-201ENSMUST00000158396 164 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm37533-201ENSMUST00000193848 545 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm44482-201ENSMUST00000199232 103 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm43583-201ENSMUST00000199235 303 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm45530-201ENSMUST00000211658 225 ntBASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
Trav3-1Q5R1I8 Gm25529-201ENSMUST00000104850 92 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm13728-201ENSMUST00000117471 400 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm12313-201ENSMUST00000121347 421 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm24851-201ENSMUST00000158028 103 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm26038-201ENSMUST00000158151 106 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm25933-201ENSMUST00000178943 108 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm6445-201ENSMUST00000189515 1112 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm44393-201ENSMUST00000197418 138 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm8125-201ENSMUST00000216602 738 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Gm26166-201ENSMUST00000083788 107 ntBASIC0.54□□□□□ -2.32
Trav3-1Q5R1I8 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Mir758-201ENSMUST00000103260 81 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Mir544-201ENSMUST00000103813 78 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm26074-201ENSMUST00000104063 129 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm12053-201ENSMUST00000119022 252 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm14554-201ENSMUST00000119548 661 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm27396-201ENSMUST00000157708 58 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm26000-201ENSMUST00000157991 107 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm21978-201ENSMUST00000179696 377 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm29452-201ENSMUST00000187996 313 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm28860-201ENSMUST00000188103 313 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm10264-201ENSMUST00000220589 429 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 AC154603.1-201ENSMUST00000224355 313 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Hmgb1l-201ENSMUST00000082150 571 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.53□□□□□ -2.32
Trav3-1Q5R1I8 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.53□□□□□ -2.33
Trav3-1Q5R1I8 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm14882-201ENSMUST00000117216 218 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm7429-201ENSMUST00000118664 348 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm15452-201ENSMUST00000119877 240 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm23208-201ENSMUST00000158666 127 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm21827-201ENSMUST00000178247 423 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm26652-202ENSMUST00000181672 475 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm37568-201ENSMUST00000191755 364 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm38146-201ENSMUST00000194121 1293 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm18985-201ENSMUST00000196472 1079 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm43739-201ENSMUST00000198294 307 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm19649-201ENSMUST00000201126 822 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm9068-201ENSMUST00000217393 455 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.52□□□□□ -2.33
Trav3-1Q5R1I8 Gm25755-201ENSMUST00000083396 107 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms