Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm44128-201ENSMUST00000204909 219 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Platr25-208ENSMUST00000222602 939 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25853-201ENSMUST00000082793 132 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Mir883a-201ENSMUST00000104824 76 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm13885-201ENSMUST00000117569 187 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm14678-201ENSMUST00000121396 482 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm14530-201ENSMUST00000122391 333 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm22559-201ENSMUST00000157329 134 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Snord13-201ENSMUST00000157627 104 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25730-201ENSMUST00000178753 165 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm27588-201ENSMUST00000185096 263 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm37946-201ENSMUST00000192064 347 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm45101-201ENSMUST00000208327 232 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.17□□□□□ -2.22
Trav5d-4Q5R1F6 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm15714-201ENSMUST00000117168 250 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm13378-201ENSMUST00000117483 336 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm11359-201ENSMUST00000120039 567 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm14785-201ENSMUST00000120185 539 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm15878-201ENSMUST00000127561 306 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm16129-201ENSMUST00000152628 486 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25243-201ENSMUST00000174912 207 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm24638-201ENSMUST00000179807 132 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.16□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25421-201ENSMUST00000104218 164 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm14215-201ENSMUST00000120578 221 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm23713-201ENSMUST00000157353 70 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm22615-201ENSMUST00000158102 70 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Mir7683-201ENSMUST00000183842 61 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm27428-201ENSMUST00000184289 110 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm29600-201ENSMUST00000188687 377 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm28151-201ENSMUST00000189404 951 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Mir3068-202ENSMUST00000197755 79 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm23741-201ENSMUST00000097237 171 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.15□□□□□ -2.23
Trav5d-4Q5R1F6 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm25313-201ENSMUST00000101817 116 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm12309-201ENSMUST00000119889 182 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm25888-201ENSMUST00000157778 302 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm24677-201ENSMUST00000158755 150 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm23289-201ENSMUST00000175615 108 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm25020-201ENSMUST00000178071 107 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm26177-201ENSMUST00000178683 107 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm23287-201ENSMUST00000179427 116 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm23143-201ENSMUST00000180137 116 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm27676-201ENSMUST00000183669 61 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Mir6335-201ENSMUST00000184081 98 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm21064-202ENSMUST00000190583 278 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm43026-201ENSMUST00000202972 325 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm45387-201ENSMUST00000209792 632 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm24871-201ENSMUST00000083099 116 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm23733-201ENSMUST00000083750 106 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Rnu5g-201ENSMUST00000093721 116 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.14□□□□□ -2.23
Trav5d-4Q5R1F6 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Mir653-201ENSMUST00000102402 85 ntBASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Gm11857-201ENSMUST00000119817 324 ntBASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Gm23429-201ENSMUST00000122486 149 ntBASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Gm26049-201ENSMUST00000157313 108 ntBASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Gm22099-201ENSMUST00000157925 123 ntBASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Gm24902-201ENSMUST00000158126 123 ntBASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Gm22011-201ENSMUST00000158790 123 ntBASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
Trav5d-4Q5R1F6 Gm38044-201ENSMUST00000192964 487 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms