Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm44910-201ENSMUST00000208451 396 ntBASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 Gm45240-201ENSMUST00000211437 674 ntBASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 Gm26108-201ENSMUST00000083973 191 ntBASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav6-3Q5R1E6 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm24274-201ENSMUST00000116787 124 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm12225-201ENSMUST00000117995 298 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm12806-201ENSMUST00000119384 268 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm13581-201ENSMUST00000120675 278 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm24601-201ENSMUST00000157970 143 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm22727-201ENSMUST00000158090 116 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm22159-201ENSMUST00000158412 130 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm25488-201ENSMUST00000158728 118 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm23476-201ENSMUST00000158881 274 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm24813-201ENSMUST00000175310 84 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm24862-201ENSMUST00000179103 79 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm23310-201ENSMUST00000179105 79 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm25461-201ENSMUST00000179293 79 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm29231-201ENSMUST00000179850 319 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm38261-201ENSMUST00000192608 316 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm44555-201ENSMUST00000209008 148 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm8940-201ENSMUST00000212585 219 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm25853-201ENSMUST00000082793 132 ntBASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav6-3Q5R1E6 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm24098-201ENSMUST00000102075 109 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm25381-201ENSMUST00000102078 109 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm14293-201ENSMUST00000118528 577 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm12779-201ENSMUST00000121496 143 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm23196-201ENSMUST00000158806 107 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm4468-201ENSMUST00000170206 294 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Mir7047-201ENSMUST00000184595 64 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm29950-201ENSMUST00000195273 237 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm43529-201ENSMUST00000199178 412 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm19118-201ENSMUST00000222554 98 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm25698-201ENSMUST00000082897 107 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm23096-201ENSMUST00000083447 107 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Gm23097-201ENSMUST00000083448 105 ntBASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trav6-3Q5R1E6 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm12872-201ENSMUST00000121835 320 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm24846-201ENSMUST00000158033 108 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm26401-201ENSMUST00000158502 76 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm23813-201ENSMUST00000175153 77 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm20689-201ENSMUST00000176033 279 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm28825-201ENSMUST00000186233 238 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm43245-201ENSMUST00000197603 468 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Mir497-201ENSMUST00000200557 84 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm44459-201ENSMUST00000203926 160 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm44938-201ENSMUST00000208614 427 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Gm18113-201ENSMUST00000220630 303 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Mir10a-201ENSMUST00000083585 110 ntBASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Trav6-3Q5R1E6 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trav6-3Q5R1E6 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Trav6-3Q5R1E6 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Trav6-3Q5R1E6 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Trav6-3Q5R1E6 Gm650-201ENSMUST00000144428 1551 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms