Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm45101-201ENSMUST00000208327 232 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm25088-201ENSMUST00000101803 79 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm14073-201ENSMUST00000117344 381 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm12102-201ENSMUST00000118251 604 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm15452-201ENSMUST00000119877 240 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm25283-201ENSMUST00000157272 77 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm24908-201ENSMUST00000157294 127 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm5224-201ENSMUST00000183060 350 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm45754-201ENSMUST00000212380 279 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm22265-201ENSMUST00000082947 116 ntBASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Col27a1Q5QNQ9 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm11813-201ENSMUST00000118586 291 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm12351-201ENSMUST00000118727 292 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm11352-201ENSMUST00000119264 517 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm24630-201ENSMUST00000122768 106 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm26275-201ENSMUST00000157101 268 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm22535-201ENSMUST00000158174 119 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm21758-201ENSMUST00000179336 819 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Mir6379-201ENSMUST00000183392 115 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm29647-201ENSMUST00000188795 666 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm20832-201ENSMUST00000189076 665 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm28241-201ENSMUST00000190916 235 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm28504-201ENSMUST00000190977 666 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm31511-201ENSMUST00000193134 657 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm35843-201ENSMUST00000193716 666 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm36728-201ENSMUST00000195782 665 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm34701-202ENSMUST00000204685 360 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Gm19140-201ENSMUST00000209790 421 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Col27a1Q5QNQ9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm24126-201ENSMUST00000104111 106 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm11248-201ENSMUST00000119568 201 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm5287-201ENSMUST00000120666 598 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm24925-201ENSMUST00000178157 107 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm24137-201ENSMUST00000180055 79 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm22391-201ENSMUST00000180356 79 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm43510-201ENSMUST00000197922 353 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm26206-201ENSMUST00000082908 110 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Gm23247-201ENSMUST00000083373 107 ntBASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Col27a1Q5QNQ9 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Gm24582-201ENSMUST00000103967 103 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Gm7164-201ENSMUST00000117503 450 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Gm12825-201ENSMUST00000120249 563 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Gm22452-201ENSMUST00000122804 104 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Gm22098-201ENSMUST00000157930 85 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.39□□□□□ -2.19
Col27a1Q5QNQ9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm15215-201ENSMUST00000117773 489 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm12235-201ENSMUST00000118596 170 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm15167-201ENSMUST00000121997 187 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm23559-201ENSMUST00000157824 103 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm17377-201ENSMUST00000165184 207 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Trbv6-201ENSMUST00000193743 276 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm37119-201ENSMUST00000195691 389 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm43007-201ENSMUST00000197618 291 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm44459-201ENSMUST00000203926 160 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm24045-201ENSMUST00000083113 98 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Mir883a-201ENSMUST00000104824 76 ntBASIC1.38□□□□□ -2.19
Col27a1Q5QNQ9 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms