Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm32033-201ENSMUST00000193483 339 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm42647-201ENSMUST00000195939 459 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm43901-201ENSMUST00000203247 453 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm44966-201ENSMUST00000208096 157 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm44910-201ENSMUST00000208451 396 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm26263-201ENSMUST00000083281 164 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Snord38a-201ENSMUST00000083746 71 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm23042-201ENSMUST00000083866 101 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Usp28Q5I043 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Usp28Q5I043 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Usp28Q5I043 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm24126-201ENSMUST00000104111 106 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm5287-201ENSMUST00000120666 598 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm14629-201ENSMUST00000122428 144 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm22038-201ENSMUST00000157277 242 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm25642-201ENSMUST00000175137 66 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm19032-201ENSMUST00000208584 592 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.1□□□□□ -2.07
Usp28Q5I043 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Usp28Q5I043 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm9762-201ENSMUST00000036976 444 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm24045-201ENSMUST00000083113 98 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Gm23454-201ENSMUST00000083332 133 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Snord7-201ENSMUST00000083781 97 ntBASIC2.1□□□□□ -2.07
Usp28Q5I043 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Usp28Q5I043 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm14013-201ENSMUST00000119006 270 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm11556-201ENSMUST00000120751 288 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm23429-201ENSMUST00000122486 149 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm23137-201ENSMUST00000157559 107 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm24901-201ENSMUST00000158125 110 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm15914-201ENSMUST00000161922 309 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm24518-201ENSMUST00000180275 94 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm27660-201ENSMUST00000184028 208 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Mir7081-201ENSMUST00000184490 75 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.09□□□□□ -2.07
Usp28Q5I043 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm31123-201ENSMUST00000192094 666 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.09□□□□□ -2.07
Usp28Q5I043 Gm18774-201ENSMUST00000218269 601 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Usp28Q5I043 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.09□□□□□ -2.07
Usp28Q5I043 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Usp28Q5I043 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.09□□□□□ -2.08
Usp28Q5I043 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp28Q5I043 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm11065-201ENSMUST00000111462 228 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm14073-201ENSMUST00000117344 381 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm24551-201ENSMUST00000158645 92 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm25243-201ENSMUST00000174912 207 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm27490-201ENSMUST00000184754 128 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Usp28Q5I043 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Usp28Q5I043 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Usp28Q5I043 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.08□□□□□ -2.08
Usp28Q5I043 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Usp28Q5I043 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Usp28Q5I043 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Usp28Q5I043 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.07□□□□□ -2.08
Usp28Q5I043 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Usp28Q5I043 Mir687-201ENSMUST00000102166 89 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm26342-201ENSMUST00000104557 129 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm23551-201ENSMUST00000116852 121 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.07□□□□□ -2.08
Usp28Q5I043 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm37337-201ENSMUST00000192601 993 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm38238-201ENSMUST00000194334 346 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Usp28Q5I043 Gm44533-201ENSMUST00000207782 268 ntBASIC2.07□□□□□ -2.08
Usp28Q5I043 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms