Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Mir7215-201ENSMUST00000200383 51 ntBASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm45366-201ENSMUST00000209828 384 ntBASIC0.56□□□□□ -2.32
Ccdc88bQ4QRL3 Gm16428-201ENSMUST00000121193 723 ntBASIC0.55□□□□□ -2.32
Ccdc88bQ4QRL3 Gm27869-201ENSMUST00000184327 122 ntBASIC0.55□□□□□ -2.32
Ccdc88bQ4QRL3 Gm24018-201ENSMUST00000083232 107 ntBASIC0.55□□□□□ -2.32
Ccdc88bQ4QRL3 Gm10360-201ENSMUST00000097219 272 ntBASIC0.55□□□□□ -2.32
Ccdc88bQ4QRL3 Olfr1160-201ENSMUST00000099839 960 ntBASIC0.55□□□□□ -2.32
Ccdc88bQ4QRL3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.55□□□□□ -2.32
Ccdc88bQ4QRL3 Mir19b-1-201ENSMUST00000102301 87 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm23887-201ENSMUST00000122683 172 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm29299-201ENSMUST00000185609 923 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm18357-201ENSMUST00000188184 580 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm29460-201ENSMUST00000188607 714 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm42625-201ENSMUST00000198611 922 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Snord35a-201ENSMUST00000083884 90 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm28408-201ENSMUST00000191557 463 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm37098-201ENSMUST00000192290 244 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm31511-201ENSMUST00000193134 657 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Mir1291-201ENSMUST00000199842 117 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm11351-202ENSMUST00000225724 478 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm23299-201ENSMUST00000082708 79 ntBASIC0.54□□□□□ -2.32
Ccdc88bQ4QRL3 Gm27517-201ENSMUST00000184347 236 ntBASIC0.53□□□□□ -2.33
Ccdc88bQ4QRL3 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.53□□□□□ -2.33
Ccdc88bQ4QRL3 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
Ccdc88bQ4QRL3 Gm23100-201ENSMUST00000083455 141 ntBASIC0.53□□□□□ -2.33
Ccdc88bQ4QRL3 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.52□□□□□ -2.33
Ccdc88bQ4QRL3 Gm24144-201ENSMUST00000082632 111 ntBASIC0.52□□□□□ -2.33
Ccdc88bQ4QRL3 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.52□□□□□ -2.33
Ccdc88bQ4QRL3 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm4732-201ENSMUST00000118778 473 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm7346-201ENSMUST00000169661 476 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm16404-201ENSMUST00000177739 468 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm7958-201ENSMUST00000178255 468 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm7950-201ENSMUST00000179633 468 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm14598-201ENSMUST00000180109 468 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm14625-201ENSMUST00000180231 468 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Mir6376-201ENSMUST00000185149 131 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.51□□□□□ -2.33
Ccdc88bQ4QRL3 Gm14907-201ENSMUST00000121948 854 ntBASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm17154-201ENSMUST00000165748 431 ntBASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm27761-201ENSMUST00000184091 131 ntBASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm28344-201ENSMUST00000185704 279 ntBASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm44295-201ENSMUST00000203805 437 ntBASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm45530-201ENSMUST00000211658 225 ntBASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm26168-201ENSMUST00000083787 112 ntBASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.5□□□□□ -2.33
Ccdc88bQ4QRL3 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Ccdc88bQ4QRL3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.49□□□□□ -2.33
Ccdc88bQ4QRL3 Gm29573-201ENSMUST00000190291 919 ntBASIC0.49□□□□□ -2.33
Ccdc88bQ4QRL3 Gm20811-201ENSMUST00000190500 553 ntBASIC0.49□□□□□ -2.33
Ccdc88bQ4QRL3 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Ccdc88bQ4QRL3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.49□□□□□ -2.33
Ccdc88bQ4QRL3 Gm24559-201ENSMUST00000157519 121 ntBASIC0.48□□□□□ -2.33
Ccdc88bQ4QRL3 Gm16399-201ENSMUST00000181423 219 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms