Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm12071-201ENSMUST00000121968 469 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm26256-201ENSMUST00000122499 186 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Mir1942-201ENSMUST00000157274 63 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm22141-201ENSMUST00000157403 277 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm8580-201ENSMUST00000160295 464 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm20058-201ENSMUST00000186939 284 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm37353-201ENSMUST00000194497 313 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm38109-201ENSMUST00000195386 181 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm43217-201ENSMUST00000199513 367 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm44825-201ENSMUST00000207557 150 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm44598-201ENSMUST00000207566 150 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm45791-201ENSMUST00000212908 352 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm10298-201ENSMUST00000074801 265 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Mir323-201ENSMUST00000083683 86 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm11460-201ENSMUST00000118200 361 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm6071-201ENSMUST00000119561 440 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm11420-201ENSMUST00000120047 402 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm14551-201ENSMUST00000120802 256 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm11363-201ENSMUST00000121672 548 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm23713-201ENSMUST00000157353 70 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm24409-201ENSMUST00000157881 152 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm24191-201ENSMUST00000157977 122 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm22615-201ENSMUST00000158102 70 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm5329-201ENSMUST00000186898 463 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Mir3069-201ENSMUST00000198802 65 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm44524-201ENSMUST00000203899 271 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm23627-201ENSMUST00000082459 107 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm22502-201ENSMUST00000082488 107 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm22977-201ENSMUST00000082615 107 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm22806-201ENSMUST00000082738 136 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm24149-201ENSMUST00000082757 107 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm25579-201ENSMUST00000083407 106 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm22353-201ENSMUST00000083918 136 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm26327-201ENSMUST00000093724 111 ntBASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trim40Q3UWA4 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm23128-201ENSMUST00000104257 132 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm24716-201ENSMUST00000157524 104 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm23642-201ENSMUST00000157858 258 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Mir1927-201ENSMUST00000158579 109 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Mir5101-201ENSMUST00000175181 83 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm6660-201ENSMUST00000179149 468 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Mir7093-201ENSMUST00000184195 101 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm23128-202ENSMUST00000196578 133 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm34314-201ENSMUST00000203622 367 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm45445-201ENSMUST00000209586 232 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Mir423-201ENSMUST00000083584 109 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm22154-201ENSMUST00000083844 131 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Trim40Q3UWA4 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.3□□□□□ -2.04
Trim40Q3UWA4 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.29□□□□□ -2.04
Trim40Q3UWA4 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.29□□□□□ -2.04
Trim40Q3UWA4 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trim40Q3UWA4 Gm22270-201ENSMUST00000104034 132 ntBASIC2.29□□□□□ -2.04
Trim40Q3UWA4 Gm15896-201ENSMUST00000118045 440 ntBASIC2.29□□□□□ -2.04
Trim40Q3UWA4 Gm24905-201ENSMUST00000158129 104 ntBASIC2.29□□□□□ -2.04
Trim40Q3UWA4 Gm24577-201ENSMUST00000158580 63 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms