Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm43582-201ENSMUST00000196149 343 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm25636-201ENSMUST00000082666 133 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm22229-201ENSMUST00000082987 108 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm26147-201ENSMUST00000104479 114 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm15175-201ENSMUST00000117629 132 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm12370-201ENSMUST00000117809 604 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm11849-201ENSMUST00000121293 261 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm24478-201ENSMUST00000157439 158 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm26393-201ENSMUST00000157625 129 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm21673-201ENSMUST00000186640 436 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm20058-201ENSMUST00000186939 284 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm21135-201ENSMUST00000189023 436 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Trbv18-201ENSMUST00000194256 294 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm23727-201ENSMUST00000083352 164 ntBASIC2.09□□□□□ -2.07
Upf3aQ3ULJ3 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm12191-201ENSMUST00000118307 348 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm9703-201ENSMUST00000119573 343 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm15266-201ENSMUST00000119635 255 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm14366-201ENSMUST00000121970 730 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm23981-201ENSMUST00000157136 106 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm25113-201ENSMUST00000157185 143 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm22037-201ENSMUST00000157280 296 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm24053-201ENSMUST00000158620 105 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm29073-201ENSMUST00000185563 664 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm29165-201ENSMUST00000190655 664 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm29211-201ENSMUST00000191470 664 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Trbv22-201ENSMUST00000191697 291 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm45366-201ENSMUST00000209828 384 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm22683-201ENSMUST00000082854 137 ntBASIC2.08□□□□□ -2.08
Upf3aQ3ULJ3 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm14823-201ENSMUST00000117698 238 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm12748-201ENSMUST00000120763 504 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm16428-201ENSMUST00000121193 723 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm25052-201ENSMUST00000122661 158 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm22483-201ENSMUST00000157986 274 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm23068-201ENSMUST00000158239 293 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm24315-201ENSMUST00000177835 127 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm22633-201ENSMUST00000179834 107 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm11392-201ENSMUST00000181419 710 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm27761-201ENSMUST00000184091 131 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Trbv24-201ENSMUST00000194614 347 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm6059-201ENSMUST00000196903 340 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm25820-201ENSMUST00000198589 127 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm44923-201ENSMUST00000206673 85 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm45878-201ENSMUST00000211839 241 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm22247-201ENSMUST00000082476 131 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm25586-201ENSMUST00000082499 112 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.07□□□□□ -2.08
Upf3aQ3ULJ3 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm15167-201ENSMUST00000121997 187 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm13368-201ENSMUST00000122443 430 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm26256-201ENSMUST00000122499 186 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm25488-201ENSMUST00000158728 118 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm23144-201ENSMUST00000180226 107 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Mir7679-201ENSMUST00000183379 63 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Mir6352-201ENSMUST00000184495 116 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm10193-201ENSMUST00000188288 231 ntBASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.06□□□□□ -2.08
Upf3aQ3ULJ3 Gm37455-201ENSMUST00000191993 529 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms