Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm43550-201ENSMUST00000200597 303 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm29809-201ENSMUST00000218423 493 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm18696-201ENSMUST00000220103 274 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Mir743b-201ENSMUST00000104751 77 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm22038-201ENSMUST00000157277 242 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm16326-201ENSMUST00000162843 414 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm8114-201ENSMUST00000172225 484 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm23186-201ENSMUST00000180078 107 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm26622-201ENSMUST00000180520 298 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm37037-201ENSMUST00000194475 424 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm44555-201ENSMUST00000209008 148 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm23454-201ENSMUST00000083332 133 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm23096-201ENSMUST00000083447 107 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm650-201ENSMUST00000144428 1551 ntBASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.27□□□□□ -2.05
Trafd1Q3UDK1 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm23422-201ENSMUST00000102000 107 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Mir687-201ENSMUST00000102166 89 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm22656-201ENSMUST00000104199 171 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm26015-201ENSMUST00000104402 125 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm14602-201ENSMUST00000118625 340 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm5287-201ENSMUST00000120666 598 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm24839-201ENSMUST00000122602 107 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm26414-201ENSMUST00000157674 269 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm23016-201ENSMUST00000158431 62 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm22136-201ENSMUST00000158751 268 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm20794-201ENSMUST00000177626 628 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm21744-201ENSMUST00000178403 662 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm25314-201ENSMUST00000178810 79 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm21171-201ENSMUST00000180048 673 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm23190-201ENSMUST00000180307 64 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm28700-201ENSMUST00000187614 579 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm29350-201ENSMUST00000189141 541 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm28843-201ENSMUST00000189198 678 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm29546-201ENSMUST00000191171 678 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm37455-201ENSMUST00000191993 529 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm42647-201ENSMUST00000195939 459 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm43431-201ENSMUST00000198577 340 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm45402-201ENSMUST00000211796 223 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Mir208a-201ENSMUST00000083498 83 ntBASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.26□□□□□ -2.05
Trafd1Q3UDK1 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm13331-201ENSMUST00000117500 448 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm11386-201ENSMUST00000117761 347 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm11512-201ENSMUST00000119669 663 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm14736-201ENSMUST00000121470 336 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm14848-201ENSMUST00000121850 467 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm23411-201ENSMUST00000157988 62 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm24900-201ENSMUST00000158128 134 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm24769-201ENSMUST00000158506 129 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm23523-201ENSMUST00000180190 107 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm23862-201ENSMUST00000180342 94 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm7654-201ENSMUST00000186738 683 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm29429-201ENSMUST00000187071 121 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm7871-201ENSMUST00000195346 618 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm44465-201ENSMUST00000199536 114 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm19140-201ENSMUST00000209790 421 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 Gm45395-201ENSMUST00000209891 559 ntBASIC2.25□□□□□ -2.05
Trafd1Q3UDK1 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms