Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.34□□□□□ -1.87
Col8a1Q00780 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col8a1Q00780 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col8a1Q00780 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
Col8a1Q00780 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Col8a1Q00780 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col8a1Q00780 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col8a1Q00780 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col8a1Q00780 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm25407-201ENSMUST00000104102 134 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm22217-201ENSMUST00000157556 313 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm26414-201ENSMUST00000157674 269 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Mir1967-201ENSMUST00000157789 82 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm24898-201ENSMUST00000158133 106 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm27535-201ENSMUST00000183814 157 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm43978-201ENSMUST00000203491 451 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm45013-201ENSMUST00000206883 178 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm44657-201ENSMUST00000208568 450 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm9712-201ENSMUST00000210842 311 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col8a1Q00780 AF357428-201ENSMUST00000083815 69 ntBASIC3.33□□□□□ -1.88
Col8a1Q00780 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col8a1Q00780 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
Col8a1Q00780 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col8a1Q00780 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col8a1Q00780 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.33□□□□□ -1.88
Col8a1Q00780 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col8a1Q00780 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col8a1Q00780 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm25421-201ENSMUST00000104218 164 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm13273-201ENSMUST00000119737 159 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm23540-201ENSMUST00000157543 164 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm17166-201ENSMUST00000172006 431 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm24084-201ENSMUST00000175173 137 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm28627-201ENSMUST00000186141 453 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm19901-201ENSMUST00000192191 495 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm37343-201ENSMUST00000192542 111 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm21007-201ENSMUST00000221024 326 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Gm25814-201ENSMUST00000082754 107 ntBASIC3.32□□□□□ -1.88
Col8a1Q00780 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col8a1Q00780 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Col8a1Q00780 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col8a1Q00780 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm23063-201ENSMUST00000102350 93 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm14551-201ENSMUST00000120802 256 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm14922-201ENSMUST00000121131 163 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm23044-201ENSMUST00000157891 100 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm37001-201ENSMUST00000193377 190 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm37417-201ENSMUST00000195257 454 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Mir465d-201ENSMUST00000196314 58 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm4644-201ENSMUST00000197587 400 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm43955-201ENSMUST00000204332 142 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm45162-201ENSMUST00000209013 618 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col8a1Q00780 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm26121-201ENSMUST00000083364 162 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col8a1Q00780 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col8a1Q00780 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col8a1Q00780 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col8a1Q00780 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.31□□□□□ -1.88
Col8a1Q00780 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Col8a1Q00780 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col8a1Q00780 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col8a1Q00780 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Col8a1Q00780 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms