Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.48□□□□□ -1.85
Sf3b6P59708 Gm19786-201ENSMUST00000222589 580 ntBASIC3.48□□□□□ -1.85
Sf3b6P59708 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.48□□□□□ -1.85
Sf3b6P59708 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.48□□□□□ -1.85
Sf3b6P59708 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Sf3b6P59708 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Sf3b6P59708 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sf3b6P59708 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sf3b6P59708 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sf3b6P59708 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.47□□□□□ -1.85
Sf3b6P59708 Snord19-201ENSMUST00000104609 76 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm13419-201ENSMUST00000121711 271 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm25177-201ENSMUST00000122634 117 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm22988-201ENSMUST00000122759 144 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm23559-201ENSMUST00000157824 103 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.47□□□□□ -1.85
Sf3b6P59708 Mir7074-201ENSMUST00000183884 63 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm28500-201ENSMUST00000190286 151 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Trbv6-201ENSMUST00000193743 276 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm43814-201ENSMUST00000197851 413 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm19790-201ENSMUST00000214414 251 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.47□□□□□ -1.85
Sf3b6P59708 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Snord21-201ENSMUST00000082519 94 ntBASIC3.47□□□□□ -1.85
Sf3b6P59708 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sf3b6P59708 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sf3b6P59708 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Sf3b6P59708 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Sf3b6P59708 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Sf3b6P59708 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Sf3b6P59708 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
Sf3b6P59708 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Sf3b6P59708 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
Sf3b6P59708 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm24096-201ENSMUST00000103905 110 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm22493-201ENSMUST00000104494 132 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Snora64-201ENSMUST00000104521 134 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm12173-201ENSMUST00000117622 273 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm12190-201ENSMUST00000120001 187 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm14473-201ENSMUST00000122269 557 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm13852-201ENSMUST00000122350 242 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm25863-201ENSMUST00000158249 329 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm23209-201ENSMUST00000158667 110 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm27828-201ENSMUST00000184108 119 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm29005-201ENSMUST00000186773 320 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm38183-201ENSMUST00000193189 205 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Mir5121-201ENSMUST00000198528 74 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm35857-201ENSMUST00000212739 178 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Sf3b6P59708 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Sf3b6P59708 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Mir27a-201ENSMUST00000083510 87 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Sf3b6P59708 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Sf3b6P59708 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Sf3b6P59708 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.46□□□□□ -1.86
Sf3b6P59708 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Sf3b6P59708 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.45□□□□□ -1.86
Sf3b6P59708 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm24582-201ENSMUST00000103967 103 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm23481-201ENSMUST00000104173 131 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm13345-201ENSMUST00000121928 228 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm23466-201ENSMUST00000157133 106 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm22883-201ENSMUST00000157376 106 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm24056-201ENSMUST00000158617 146 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm27761-201ENSMUST00000184091 131 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Mir6537-201ENSMUST00000184150 110 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Mir7028-201ENSMUST00000185016 64 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm37624-201ENSMUST00000193751 219 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm24966-201ENSMUST00000082443 79 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Snord82-201ENSMUST00000082889 70 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Sf3b6P59708 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Sf3b6P59708 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.45□□□□□ -1.86
Sf3b6P59708 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms