Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm8940-201ENSMUST00000212585 219 ntBASIC1.27□□□□□ -2.21
Cux1P53564 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.27□□□□□ -2.21
Cux1P53564 Gm26421-201ENSMUST00000104279 132 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm26256-201ENSMUST00000122499 186 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm22315-201ENSMUST00000158010 143 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm17085-201ENSMUST00000165425 502 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm18775-201ENSMUST00000190763 586 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm42924-201ENSMUST00000197261 185 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm43007-201ENSMUST00000197618 291 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm43171-201ENSMUST00000199882 291 ntBASIC1.26□□□□□ -2.21
Cux1P53564 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.26□□□□□ -2.21
Cux1P53564 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cux1P53564 Gm24805-201ENSMUST00000082931 104 ntBASIC1.26□□□□□ -2.21
Cux1P53564 Gm14835-201ENSMUST00000119039 315 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm14731-201ENSMUST00000119216 376 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm9703-201ENSMUST00000119573 343 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm15223-201ENSMUST00000120989 826 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm16354-201ENSMUST00000155376 150 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm28755-201ENSMUST00000185773 199 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Cux1P53564 Gm24928-201ENSMUST00000083399 107 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm25897-201ENSMUST00000083709 107 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm14678-201ENSMUST00000121396 482 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm22960-201ENSMUST00000122517 104 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm25026-201ENSMUST00000175017 188 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm22776-201ENSMUST00000178634 94 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Gm23767-201ENSMUST00000179278 94 ntBASIC1.25□□□□□ -2.21
Cux1P53564 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.25□□□□□ -2.21
Cux1P53564 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Mir151-201ENSMUST00000083678 68 ntBASIC1.25□□□□□ -2.21
Cux1P53564 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm14674-201ENSMUST00000117816 342 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm12191-201ENSMUST00000118307 348 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm15530-201ENSMUST00000122206 555 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm24592-201ENSMUST00000122505 106 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm25375-201ENSMUST00000158157 135 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm22382-201ENSMUST00000158185 130 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm23355-201ENSMUST00000177614 107 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm25633-201ENSMUST00000178565 107 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
Cux1P53564 Gm8403-201ENSMUST00000189712 1298 ntBASIC1.24□□□□□ -2.21
Cux1P53564 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Cux1P53564 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm23721-201ENSMUST00000083005 107 ntBASIC1.24□□□□□ -2.21
Cux1P53564 Gm22689-201ENSMUST00000102452 110 ntBASIC1.23□□□□□ -2.21
Cux1P53564 Gm11490-201ENSMUST00000118128 272 ntBASIC1.23□□□□□ -2.21
Cux1P53564 Gm26414-201ENSMUST00000157674 269 ntBASIC1.23□□□□□ -2.21
Cux1P53564 Gm22862-201ENSMUST00000178593 121 ntBASIC1.23□□□□□ -2.21
Cux1P53564 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Cux1P53564 Gm37337-201ENSMUST00000192601 993 ntBASIC1.23□□□□□ -2.21
Cux1P53564 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Cux1P53564 Gm7871-201ENSMUST00000195346 618 ntBASIC1.23□□□□□ -2.21
Cux1P53564 Gm45438-201ENSMUST00000210242 564 ntBASIC1.23□□□□□ -2.21
Cux1P53564 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.23□□□□□ -2.21
Cux1P53564 Mir107-201ENSMUST00000083660 87 ntBASIC1.23□□□□□ -2.21
Cux1P53564 Gm11359-201ENSMUST00000120039 567 ntBASIC1.22□□□□□ -2.21
Cux1P53564 Gm16428-201ENSMUST00000121193 723 ntBASIC1.22□□□□□ -2.21
Cux1P53564 Gm11384-201ENSMUST00000121376 303 ntBASIC1.22□□□□□ -2.21
Cux1P53564 Snord43-201ENSMUST00000199549 108 ntBASIC1.22□□□□□ -2.21
Cux1P53564 Gm46193-201ENSMUST00000219399 364 ntBASIC1.22□□□□□ -2.21
Cux1P53564 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.22□□□□□ -2.21
Cux1P53564 Olfr197-201ENSMUST00000080031 926 ntBASIC1.22□□□□□ -2.21
Cux1P53564 Gm24412-201ENSMUST00000083426 109 ntBASIC1.22□□□□□ -2.21
Cux1P53564 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.22□□□□□ -2.21
Cux1P53564 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
Cux1P53564 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.21□□□□□ -2.21
Cux1P53564 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Cux1P53564 Gm14566-201ENSMUST00000118915 321 ntBASIC1.21□□□□□ -2.22
Cux1P53564 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.21□□□□□ -2.22
Cux1P53564 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.21□□□□□ -2.22
Cux1P53564 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.21□□□□□ -2.22
Cux1P53564 Gm22583-201ENSMUST00000178031 107 ntBASIC1.21□□□□□ -2.22
Cux1P53564 Gm29550-201ENSMUST00000185543 285 ntBASIC1.21□□□□□ -2.22
Cux1P53564 Gm42533-201ENSMUST00000196247 157 ntBASIC1.21□□□□□ -2.22
Cux1P53564 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.21□□□□□ -2.22
Cux1P53564 Gm43142-201ENSMUST00000198670 361 ntBASIC1.21□□□□□ -2.22
Cux1P53564 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.21□□□□□ -2.22
Cux1P53564 Gm25497-201ENSMUST00000104425 132 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm14716-201ENSMUST00000120138 718 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.2□□□□□ -2.22
Cux1P53564 Gm26157-201ENSMUST00000158974 126 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm45071-201ENSMUST00000205353 571 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm17990-201ENSMUST00000211728 553 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cux1P53564 Snora3-201ENSMUST00000083082 132 ntBASIC1.2□□□□□ -2.22
Cux1P53564 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Cux1P53564 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Cux1P53564 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cux1P53564 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Cux1P53564 Gm13359-201ENSMUST00000119000 695 ntBASIC1.2□□□□□ -2.22
Cux1P53564 Gm12096-201ENSMUST00000121149 829 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms